Sphingomonas sp. CL5.1: F9288_03320
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Entry
F9288_03320 CDS
T11042
Symbol
thiC
Name
(Genbank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00730
Thiamine metabolism
spcl01100
Metabolic pathways
spcl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
F9288_03320 (thiC)
Enzymes [BR:
spcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
F9288_03320 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QKR98779
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Position
665143..666999
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AA seq
618 aa
AA seq
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MADIPARTEIGVTTGPIRGSRKIHVGPLGVAMRAIDLEPSSGEPPLNVYDTSGPYTDPEA
RIDIMAGLPALRREWIIGRGDVESYDARSVKPEDNGLKGPDRSAGVAQFPNVVKRPLRAK
PGANVSQMHYARRGIITPEMEYVATRENLGREMLKEYARDGQSWGAAIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIRWGADT
VMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQG
VDYFTIHAGVRLPYVPLTAKRVTGIVSRGGSIMAKWCLAHHRESFLYERFDEITEIMKAY
DIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWAQDVQVMIEGPGHVPMHKIKEN
MDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKLRDDALSRARFEFRWRDQFNLSLDPDTAEEYH
DQTLPAEGAKSAHFCSMCGPKFCSMKITQEVRDFARLQNQSADAFVAADAEAGMKQMSEV
YNETGRELYMGAGDREHD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatccctgcccgcaccgagatcggcgtcaccaccggcccgattcgcggttcc
cgcaagatccatgtcggcccgctcggggtcgcgatgcgcgcgatcgatctggagccgtcg
tcgggcgagccgccgctcaacgtctatgacacgtccgggccttataccgatcccgaggcg
cggatcgacatcatggcgggcctacccgcgctgcgccgcgagtggatcatcgggcgcggc
gacgtcgaaagctatgacgcgcgctcggtgaagccggaggacaacggcctcaagggcccg
gaccgttcggccggcgtcgcccaattccccaatgtcgtgaagcgtccgctgcgcgccaag
ccgggcgcgaacgtcagccagatgcactatgcccggcgcggcatcatcacgccggagatg
gaatatgtcgcgacccgcgagaatcttgggcgcgagatgctcaaggaatatgcccgcgat
ggccagagctggggcgcggcgatacccgattacgtgacgccggagttcgtccgcgacgag
gtggcgcgcgggcgggcgatcatccccaacaacatcaaccacccggaaagcgagccgatg
gcgatcggccgcaacttcctcgtcaagatcaacgccaatatcggcaattcggcggtcgcc
agcgacgtggcaagcgaggtcgacaagatggtctggtcgatccgctggggcgcggacacg
gtgatggacctctccaccggccgcaacatccacgacacgcgcgaatggatcatccgcaac
tcgcccgtgccgatcggcaccgtgccgatctatcaggcgctggagaaggtcggcggcatc
gccgaggacctgacgtgggaaatcttccgcgacacgctgatcgagcaggccgagcagggc
gtcgattatttcacgatccacgccggcgtgcgcctgccctatgtgccgctcaccgccaag
cgcgtcaccggaatcgtctcgcgcggcggctcgatcatggcgaaatggtgcctcgcgcat
caccgcgaatccttcctctacgagcggttcgacgagatcaccgagatcatgaaggcctat
gacatcgcctattcgctgggcgacggcctgcgccccggctcgatcgccgacgccaacgac
gaggcgcagttcgccgagctctacactttgggcgagctgacgaagcgcgcctgggcgcag
gacgtgcaggtgatgatcgaaggccccggccatgtgccgatgcacaagatcaaggagaat
atggacaagcagctcgaggcgtgcggcgaggcccccttctacacgctcgggccgctgacc
accgacatcgcgcctggctatgatcacatcaccagcggcatcggcgcggcgatgatcggc
tggtacggcacggcgatgctctgctacgtcacgccgaaggagcatctcggcctgcccgac
cgcgacgacgtgaaggtgggcgtcgtcacctacaagctcgccgcccatgccgccgatctg
gcgaaggggcacccggcggccaagctgcgcgacgacgcgctgagccgcgcccgcttcgaa
ttccgctggcgcgaccagttcaacctcagcctcgatcccgacacggcggaggaatatcac
gaccagacgctgccggcggaaggcgcgaagagtgcgcatttctgctcgatgtgcgggccg
aaattctgctcgatgaagatcacgcaggaagtacgcgatttcgcccggttgcagaatcag
tcggcggacgccttcgtcgcggccgacgccgaagccggcatgaagcagatgagcgaggtc
tataacgaaaccggccgcgagctctacatgggcgcgggcgaccgggagcatgattga
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