Sphingomonas sp. CL5.1: F9288_03330
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Entry
F9288_03330 CDS
T11042
Symbol
ung
Name
(Genbank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F9288_03330 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_03330 (ung)
Enzymes [BR:
spcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
F9288_03330 (ung)
DNA repair and recombination proteins [BR:
spcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F9288_03330 (ung)
Prokaryotic type
F9288_03330 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
QKR98781
LinkDB
All DBs
Position
complement(667783..668481)
Genome browser
AA seq
232 aa
AA seq
DB search
MADPKMDPSWLEPLRAEFSSDYMGALRQFLLAEKAAGKQIFPHSSNWFRALELTPLPDVR
VVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLVNIYKELESDCGIRPPAHGFLESWAEQG
VLLLNSVLTVVSGQAAAHRDRGWEKFTDAIIRLIAARPEPIVFMLWGSYAQKKAAFVRSV
EQGGHHLVLKAAHPSPLSAHSGWFGCRHFSQANAFLERNGRGRIDWALPEKV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccgaagatggacccgagctggctggagccgctgcgcgccgagttctccagc
gactatatgggcgcgctccgccagttcctgctggcggagaaagcggccgggaagcagatt
ttcccgcattccagcaactggttccgcgcactggagctgacgccgctgccggacgtgcgt
gtcgtgatcctcgggcaggacccatatcacggtccggggcaggcgcatggcctgtgcttc
tccgtccgccccggtgtccgcccgccgccgagcctcgtcaacatctacaaggagctggag
agcgattgcggcatccggccgccggcgcacggcttcctcgaaagctgggcggagcagggc
gtgctgctgctcaacagcgtgctgaccgtggtgagcgggcaggccgccgcgcaccgcgac
cgggggtgggagaagttcaccgacgcgatcatccgcctgatcgccgcgcggccggagccg
atcgtcttcatgctgtggggcagctatgcgcagaagaaggccgcgttcgtgcgcagcgtg
gagcagggcgggcaccatctggtgctgaaggctgcgcacccatcgccgctgtcggcgcat
agcggctggttcggctgccggcatttctcgcaggcgaatgcgtttctggaacggaatggg
cggggacggatcgactgggcgctgccggagaaggtctaa
DBGET
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