Sphingomonas sp. CL5.1: F9288_04175
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Entry
F9288_04175 CDS
T11042
Symbol
recF
Name
(Genbank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F9288_04175 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_04175 (recF)
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F9288_04175 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_29
AAA_30
AAA_27
ABC_tran
AAA_22
SbcC_Walker_B
AAA_28
nSTAND3
T2SSE
AAA_15
cobW
TPR_10
Motif
Other DBs
NCBI-ProteinID:
QKR98927
UniProt:
A0A6N0X0V5
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Position
828732..829772
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AA seq
346 aa
AA seq
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MLDRLVLSDFRNHDALTLAPARGFVVLTGPNGAGKTNVLEAVSLLAPGRGLRRAALGEIA
RTGAGGFGVAATLADGTEIATGTLPGAPERRVVRINGAASAANALAERLSIIWLTPAMDR
LFTEPASTRRQFLDRLALALFPGHAVHAARYDAAMRSRNRLLGEEHPDREWLGALERRMA
EHGAALDAVRRETVVALAERLAAQPAGDFPRAGLALEGWSGDAGDLAEQLRTGRARDAAA
GRALAGPHRVDLLAWHLEKDRAAALASTGEQKALMFGIVLAHAELVTARTGAPPVMLLDE
VAAHLDPARRAALFARLGGCGQVWMTGTEQALFAEIGGDATRIALG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccggctcgtcctctccgatttccgcaaccatgacgcgctgacgctcgcgccg
gcgcgcggcttcgtggtgctgaccgggccgaacggcgcggggaagaccaatgtgctggaa
gcggtgtcgctgctcgcgccgggccggggcctgcgccgcgccgcgctgggcgagatcgcg
cgcaccggcgcgggcggcttcggcgtcgccgcgacgctggccgacgggacggagatcgcc
accggcacgctgccaggcgcgccggaacgccgcgtggtgcggatcaacggcgcggcatcg
gccgccaatgcgctggccgaacggctctcgataatatggctcaccccggcgatggatcgg
ctattcacagagccagcctccacccgccgccagttcctcgaccggctcgcgctggcgctg
ttccccggccatgccgtccatgccgcgcgctacgatgcggcgatgcgcagccgcaacagg
ctgctgggagaggagcaccccgatcgcgaatggctcggcgcgctcgaacgacgcatggcc
gagcatggcgcggcgctcgacgcggtgcggcgcgagacagtggtggcgctcgccgaacgg
ctggcggcgcaaccggcgggcgattttccgcgcgccgggctggcgctggaggggtggagc
ggcgacgctggcgatctcgcggagcagctccgcaccggccgcgcgcgcgacgcagccgcc
ggacgcgcgctagcggggccgcatcgcgtcgacctgctggcgtggcatctggagaaggat
cgcgccgccgcgctcgcctccaccggtgagcagaaggcgctgatgttcggcatcgtcctc
gcccatgccgagctggtcacggcgcgcaccggagcgccgccggtcatgctgctcgacgaa
gtggcggcgcatctcgatcccgcgcgccgcgccgccctgttcgcgcggctcggcggatgc
ggacaggtgtggatgaccggaaccgagcaggcgctgttcgccgaaatcggcggcgacgcg
acgcggatcgcgctcggctga
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