KEGG   Sphingomonas sp. CL5.1: F9288_04670
Entry
F9288_04670       CDS       T11042                                 
Name
(Genbank) ATP-dependent DNA helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
spcl  Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spcl03400]
    F9288_04670
Enzymes [BR:spcl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     F9288_04670
DNA repair and recombination proteins [BR:spcl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F9288_04670
SSDB
Motif
Pfam: Helicase_C_2 DEAD Helicase_C
Other DBs
NCBI-ProteinID: QKR99018
UniProt: A0A6N0WZD6
LinkDB
Position
complement(926618..929329)
AA seq 903 aa
MTVLPYPALHASHSGVWIAEAGKVRAIGRGEAIRIAADTPVILLNAPLIGQRLGYGELSG
LDLLELFAFLRPAQFMVPTPKGLAAAAGLEPPENDAAVAPFLLAAAARLLAIPEGDWPER
EGAWTAAQTLFRLRWPWAPLLADRIVRPRDAERWLFSRLPEWEEAAPRPMPRTIALDGDA
VQERLARLTGANREPRPGQRAYADAAADAFAPRVARESPNLVLAEAGTGIGKTLGYLAPA
SLWAEQAQGAVWISTYTKALQRQLSHETVRLHPDATVRKARVVTRKGRENYLCLLNLEDA
LQGGFSGRAAILAQMVARWAAYSADGDMVGGDLPGWLVTLFRRNGTAALTDRRGECVYAG
CPHYRKCFIEHAARASVEADIVIANHALVMVNAARGRETATRPTRYVFDEGHHLFDAADA
MFSTALTGQEAIELRRWVLGPEGSGRGRRRGLAARLSDVASYDEAGGRAIGDAVTAAQAL
TSDGWLARLAEGAPFGPVEALLAAVRGVVYARAEQPGDAGYGLETEIAEPPPALIDAAGP
AAQALDALLRPLVTLGKRLEAVLAEAPDWMDGQARARIEGAIASLGWRAETVAAWLSLLA
RIGGPADADFVDWLAVDRIEGREFDIGLHRHWLDPTRPFAEVVLKPAHGALVTSATLTAG
GDWHTAEARVGAPHLSMPPERFEAASPFDYAACAEVLIVTDVKRGDQAALANAYARLIEA
AGGGTLGLFTAIRRLRGVHAAIADRLARAGLPLHAQHVDPIDTGTLVDIFRDDPHASLLG
TDALRDGMDVPGDSLRLVVMEGVPWPKPSVLHAARRLAGGGSAYDDRIVRARLAQAFGRL
IRSARDRGAFVLLSAAMPSRQLSAFPPGVAIARVPLDEAIARVRQRLSSGARLGHEAAPA
DPN
NT seq 2712 nt   +upstreamnt  +downstreamnt
gtgaccgttctcccttatcccgcgctgcatgccagccattccggcgtgtggatcgccgag
gccgggaaggtgcgcgcgatcgggcgcggggaggcgatccgcatcgccgccgatacgccg
gtgatcctgctcaacgcgccgttgatcgggcagcgactcggctatggcgagctttcgggg
ctggacctgctggagctgttcgctttcctgcggccggcgcaattcatggtgccgacgccc
aaggggctcgccgccgccgccgggctggagccgcccgagaatgacgcggcggtcgcgccc
ttcctgctggcggccgcagcgcggctgctcgcgattcccgagggcgactggcccgagcgt
gagggcgcatggaccgctgcgcaaacgctgttccgcctgcgctggccgtgggcaccactg
ctcgccgaccgcatcgtgcggccgcgcgatgcggagcgctggctgttctcacgtctgccg
gaatgggaggaagccgcgccgcgtccgatgccgcgcacgatcgcgctcgacggcgatgcg
gtgcaggagcggctggcgcgcctcaccggcgcgaaccgcgagccgcgccccggccagcgc
gcttatgccgatgccgccgccgatgccttcgccccgcgagtcgcgcgcgaatcgcccaat
ctcgtgctggcggaggcggggacggggatcggcaagacgctcgggtatctcgcccccgcc
tcgctgtgggcggagcaggcgcagggcgcggtgtggatcagcacctataccaaggcgctg
caacgccagctttcgcacgagacggtgcggctccatcccgatgcgaccgtgcgcaaggcg
cgcgtcgtcacccgcaagggacgcgagaactacctttgcctgctcaacctggaggatgcg
ttgcagggcgggttctccggccgcgcggcgatcctcgcgcagatggtggcgcgctgggcg
gcctatagcgcggatggcgacatggtggggggcgacctgcccggctggctcgtcaccctg
ttccgccgcaacggcacggcggcgctgaccgaccggcgcggcgagtgcgtctatgccggc
tgcccgcattaccggaaatgcttcatcgagcatgccgcgcgcgcctcggtggaggcggat
atcgtcatcgccaatcatgccttggtgatggtcaacgccgcgcgcgggcgggaaaccgcg
actcgcccgacgcgctacgtgttcgacgagggccatcacctgttcgacgccgccgacgcg
atgttctccaccgcgctgacggggcaggaggcgatcgagctgcgccgctgggtgctcggc
ccggagggaagcgggcgggggcggcggcgtgggctggcggcgcgattgtccgacgtggcg
agctatgacgaggcgggcgggcgcgccatcggagacgcggtgacggcggcgcaggcgctg
acgagcgacggctggctggcgcggctggcggagggcgcgccgttcggcccggtcgaggcg
ttgctcgcggcggtgcgcggcgtggtctatgcccgcgcggagcagccgggcgatgctggc
tatgggctagagaccgagatcgccgagccgccgcccgcgctgatcgacgccgccggcccg
gccgcgcaggcgctcgacgccttgctccgcccgttggtgacgctcggcaaacggctggag
gcggtgctggccgaggcgccggactggatggatgggcaggcgcgcgcgcggatcgagggc
gcgatcgcctcgctcggctggcgcgcggagacggtggcggcgtggctgtcactgctcgcg
cggatcggcgggccggccgatgccgatttcgtcgactggctggcggtggaccggattgag
gggcgcgagttcgacatcggcctccaccgccactggctcgatccgacgcggcctttcgcg
gaggtggtgctgaagcccgcgcacggcgcgctcgtcacctccgccacgctcaccgccggg
ggcgactggcacactgcggaggcgcgggtcggcgcgccgcatctctccatgccgccggag
cgattcgaggcggccagcccgttcgattacgccgcctgcgccgaggtgctgatcgtcacc
gacgtgaagcgcggcgatcaggccgcgctcgccaacgcctatgcgcggctgatcgaggcg
gcgggcggcggcacgctcgggctgttcaccgcgatccgccggctgcgcggcgtccatgcc
gcgatcgccgaccggctggcgcgcgccggcctgccgctccacgcgcagcacgtcgatccg
atcgacacgggcacgttggtcgatatcttccgtgacgatccgcacgcctcgctgctcggc
accgatgcgttgcgcgacggcatggacgtgccgggcgattcgctgcggctggtggtgatg
gagggcgtgccgtggcccaagccgagcgtgctccacgccgcgcggcggctggcgggcggc
ggcagcgcctatgacgaccgcatcgtgcgcgcgcggctggcgcaggcgttcgggcggctg
atccgctcggcgcgggatcgcggggcattcgtgttgctctcggcggcgatgccgtcgcgg
cagctttccgccttcccgccgggcgtggcgatcgcgcgcgtgccgctcgacgaagcgatc
gcgcgggtgcggcagcgtctttcctccggcgcgcgtctggggcatgaggctgctcccgcc
gacccgaactga

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