Sphingomonas sp. CL5.1: F9288_04765
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Entry
F9288_04765 CDS
T11042
Name
(Genbank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F9288_04765
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spcl01007
]
F9288_04765
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spcl03016
]
F9288_04765
Enzymes [BR:
spcl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
F9288_04765
Amino acid related enzymes [BR:
spcl01007
]
Aminoacyl-tRNA synthetase
Class II (U)
F9288_04765
Transfer RNA biogenesis [BR:
spcl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
F9288_04765
Prokaryotic type
F9288_04765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QKR99035
UniProt:
A0A6N0WWQ0
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All DBs
Position
complement(947025..949406)
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AA seq
793 aa
AA seq
DB search
MKFTLGWLKEHLDTDATLDAIVEGLTRIGLEVEGVDNPGEKLAAFRIAKVLTAERHPQAD
KLQVLSVDAGDGPLQVVCGAPNARAELVGVFGMPGATVPANGMVLKVAAIRGVESNGMMC
SSRELELGDDHDGIIELPADAPVGTSYPAYAGLDDPVIDVAITPNRQDCMGVRGIARDLA
AAGLGTLRPLAEVYRAAIAPVPGDDPAPDVRTDDPEGCPAFYAQAVSGVANGASPEWMRQ
KLNAIGQKPISMLVDITNFVSIDLGRPLHVYDRAKLTGALVARRAREDETVLALNGKTYT
LDPTMTVIADDKHVHDIGGIMGGEDSGVSDATTDVLIECAYFDPDHIARTGQKLALTSDA
RQRFERGVDPAFLDDGLAIATRLVLEHCGGTPSAITRAGEAPLGTRSYAYDPARAETLGG
LAVAPERQRAILESLGFTVTADWQVTPPTWRRDIDGPADLVEEVIRIEGIDNVPPVPLDR
APGVAKPTATPEQKLERRVRRAAAARGLDEAVTWSFLSEKEAAVFGGGAWTLANPISEDL
KVMRPSLLPGLLSAAARNVKRGAGSVRLFEIGRRYLADAERPTLGLVLTGDRRPRGWRAG
KAAAFDAFDAKAEALALLAAAGAPVENLQVFGEAGDAWHPGQSGTLRLGPKTVLAAFGML
HPRTIAAFDLDGAVAAVEIYLDAIPAKRGAGFMRPAYAPPALQPVRRDFAFLVPAEVSAD
TLARAAKGADKAAIVSARVFDVFTGAGVEEGRKSVALEVMLQPGDKSFTDAELKAIADKV
VAAAAKQGAVLRG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcactttgggctggctcaaggagcatctcgataccgacgccacgctcgacgcg
atcgtcgaggggctgacgcggatcgggctggaggtcgaaggagtcgacaatccgggcgag
aagctggcggccttccgcatcgcgaaggtgctgaccgccgagcgccacccgcaggcggac
aagctgcaggtgctgtcggtcgatgccggcgatggtccgctgcaggtggtgtgcggcgca
cctaacgcccgcgcggagttggtcggcgtgttcgggatgccgggcgcgacggtgccggcg
aacggcatggtgctgaaggtcgcggcgatccggggcgtcgaatcgaacggcatgatgtgc
tccagccgcgaactggagttgggcgacgatcatgacggcatcatcgagcttcccgccgat
gcgccggtcggcacgtcttatcccgcctacgctggcctcgacgatccggtgatcgacgtg
gcgatcacgcccaaccggcaggactgcatgggcgtgcgcggcatcgcgcgcgatctggcg
gcggcggggctggggacgctgcggccgctggcggaggtctatcgtgccgcaatcgcgccg
gtgccgggcgacgaccccgcgccggacgtgcggaccgacgatcccgaaggctgtcccgct
ttctatgcgcaggctgtgtcgggcgtcgccaacggcgcgtcgccggaatggatgcggcag
aagctcaacgcgatcgggcagaagccaatctcgatgctggtggacatcaccaatttcgtc
tcgatcgatcttggccgcccgctgcacgtctatgaccgcgcgaagctgaccggcgcgctc
gtcgcccgcagggcgcgcgaggacgagacggtgctggccttgaacggcaagacctatacg
ctcgacccaacgatgacggtgatcgcggacgacaaacacgtccacgatatcggcggcatc
atgggcggcgaggattcgggcgtgtcggatgcgacgaccgacgtgctgatcgaatgcgcg
tatttcgatcccgaccatatcgcccgcaccggccagaagctcgcgctgaccagcgacgcg
cgccagcggttcgagcgcggggtggacccggcgttcctcgacgacggcctcgccatcgcg
acgcggctggtgttggagcattgcggcggcacgccctccgcgatcacgcgcgcgggcgag
gcgccgctcggcacgcgcagctacgcttatgatccggcgcgggcggagacgctcggcggc
ctcgccgtcgcgccggagcggcagcgcgcgatcctcgaatcgctcggcttcacggtgacg
gcggactggcaggtcacgcccccgacatggcggcgcgatatcgacggtccagccgatctg
gtcgaggaagtgatccgcatcgaggggatcgacaacgtccccccggttccgctcgaccgc
gcaccgggcgtcgcgaagccgaccgctacccccgagcagaagctggagcgccgcgtccgc
cgcgccgccgccgcgcgcgggctggacgaggcggtgacgtggagcttcctcagcgagaaa
gaagccgcggtgttcggcggcggcgcatggacgctcgccaatccgatcagcgaggatctg
aaggtcatgcgtccgtcgctgctgccggggctgctctcggccgccgcgcgtaacgtgaag
cgcggggcggggagtgtccgcctgttcgagatcggccggcgctatctcgccgatgccgag
cggccgacgctcgggctggtgctgaccggagaccgtcgcccgcgcggctggcgtgcgggc
aaggccgccgcgttcgatgcgtttgacgccaaggcggaggcgctggccttgctcgcggcg
gcaggcgcgccggtggagaatctgcaagtgttcggcgaggctggcgatgcgtggcatccg
ggccagtccggcacgctgcggctcgggccgaagacggtgctggcggcgttcgggatgctc
cacccgcgcacgatcgcggcgttcgacctcgacggcgcggtggcggcggtggaaatctac
ctcgacgctatcccggcgaagcgtggcgcgggtttcatgcgcccggcctatgccccgccg
gcgctccagccggtgcggcgcgatttcgccttcctcgtgccggcggaggtgtcggccgac
acgctcgctcgcgcggcgaagggcgcggacaaggcggcgatcgtctcggcgcgagtgttc
gacgtgttcaccggcgctggcgtggaggaaggccggaaatcggtcgcgctggaggtgatg
ctccagccgggcgacaagagcttcaccgatgccgagctgaaggcgatcgccgacaaggtg
gtggcggcggcggcgaagcagggcgcggtcctgcgtggctga
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