Sphingomonas sp. CL5.1: F9288_05115
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Entry
F9288_05115 CDS
T11042
Symbol
mnmE
Name
(Genbank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spcl03016
]
F9288_05115 (mnmE)
Transfer RNA biogenesis [BR:
spcl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
F9288_05115 (mnmE)
Prokaryotic type
Methyltransferases
F9288_05115 (mnmE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QKR99102
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All DBs
Position
1016132..1017409
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AA seq
425 aa
AA seq
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MDTIFAVSSGQPPAAIAVLRMSGPRARDAVEALAGALPEPRRAVLRRLWDGDGALLDDCL
LLWFPGPSSATGEDLAEFHLHGGIATVAAVERALAAQPGLRRARGGEFTRRALENGRIDL
AQAQGLADLLEAETEAQRRAAIASVDGEVSRAVARWLTTLAGIAARIEAMIDFSDEDDVE
PADTAALDAAIRAWLADLDIILERPTVERLREGCRIVLAGSPNVGKSSLFNAMIEREAAI
VTPIAGTTRDLLETRVVRNGRLYTLIDTAGLASDTDDPVERIGIERARRAADTADIVLWL
DDSAPPAEWPVLALHPRCDMAERLITPTDRLPISRDDLRSIDHLWGAIEQRAGSLLTTDG
AALREQQRNAVIAARASMATDGMADDLLVRAEGVRYAMRQLAGIVGADATETMLDALFAR
FCIGK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcttcgccgtttcgagcggccagccacccgccgcgatcgcggtgttgcgg
atgagcggcccccgcgcgcgcgatgcggtcgaggcgctcgccggcgcgcttccggaacca
cgccgcgcggtgctgcggcggctgtgggacggtgacggcgcgttgctcgacgattgcttg
ctgctgtggttccccggcccgagcagcgcgacgggcgaggatctcgcggaattccatctg
cacggcggcatcgcgacggtggccgcggtggaacgggcgctcgcggcgcaacccggcctg
cgccgcgcgcgcgggggcgaattcacccgacgcgcgctggagaacgggcggatcgatctc
gcgcaggcgcagggtctggccgatctgctcgaagcggaaaccgaggcgcagcgccgtgcc
gccatcgccagcgtcgatggcgaggtcagccgcgccgtcgcgcgctggctcaccacgctt
gccggcatcgccgcccggatcgaggcgatgatcgacttcagcgacgaggacgatgtcgaa
ccggcggatacggcggcgctcgatgccgcgatccgcgcgtggctggccgatctcgacatc
atcctggagcgcccgactgtcgaacgactgcgcgaaggatgccgaatcgtcctcgccgga
tcacctaacgtcggtaaatcctctcttttcaacgcgatgatcgaacgcgaggccgcgatc
gtgacaccgatcgccggcacgacgcgcgatctgctcgaaacgcgcgtggtgcgcaacggg
cgtctctacaccttgatcgacacggcgggtctcgccagcgacaccgacgatccggtcgag
cggatcggcatcgaacgcgcgcgccgcgcggccgacaccgccgatatcgtgctgtggctc
gacgatagcgcgccgcccgccgagtggccggtcctcgcgcttcacccgcgttgcgacatg
gcggagcggctcattacaccgaccgatcgcctgccaatatcccgcgacgatctgcgtagc
atcgatcacttgtggggagcgatcgagcaacgcgccggttcgctccttacaaccgatggc
gccgcgctacgcgaacaacaacgcaacgccgtgatcgctgcccgcgcatccatggcgacc
gacggaatggcagacgacctgttggtacgcgccgaaggagtgcgctatgcgatgcggcaa
ttggcgggcatcgtcggcgcggacgcgaccgagacgatgctcgacgcgctgttcgcgcgt
ttctgcatcgggaagtga
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