Sphingomonas sp. CL5.1: F9288_05235
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Entry
F9288_05235 CDS
T11042
Symbol
dnaQ
Name
(Genbank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03030
DNA replication
spcl03430
Mismatch repair
spcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9288_05235 (dnaQ)
03430 Mismatch repair
F9288_05235 (dnaQ)
03440 Homologous recombination
F9288_05235 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spcl03032
]
F9288_05235 (dnaQ)
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_05235 (dnaQ)
Enzymes [BR:
spcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9288_05235 (dnaQ)
DNA replication proteins [BR:
spcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9288_05235 (dnaQ)
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9288_05235 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QKR99123
LinkDB
All DBs
Position
1038445..1039137
Genome browser
AA seq
230 aa
AA seq
DB search
MREIVFDTETTGLSFSGGDRLVEIGCVEIFNRVETGRTFHAYFNPDRAMPAEAFAVHGLS
DAFLSDKPRFPELVEAMLDFIGDAPLVAHNAGFDFGFLNGELKQCGRPLVCTTRMVDTLT
IARSKHPGAKHTLDALCSRYGIDRSHRVLHGALLDAQLLAQVYVELLGGRQIGLGLVSDV
TVVAAQPAQVRTPSVVRPARAFSASEAELIAHAAFMGRVKNPIWGSDASA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaatcgtgttcgataccgaaacgactggcctcagcttctcgggcggggacagg
ctggtggagatcggctgtgtcgagatcttcaaccgggtggagacggggcgcaccttccac
gcctatttcaacccggaccgcgcgatgccggcggaggcgttcgcggtgcacggcctgtcc
gacgccttcctttccgacaagccgcgcttccccgagctggtcgaggcgatgctcgatttc
atcggcgacgcgccgctggtcgcgcacaatgccggattcgacttcggcttcctcaacggc
gaactgaagcagtgcggccgtccactggtatgtacgacgcggatggtcgacacgctgacc
atcgcgcgatcgaaacatcccggcgcgaagcacacgctcgacgcgctctgctcgcgctac
gggatcgaccggtcgcatcgcgtgctgcacggcgccttgctcgacgcgcaattgctggcg
caggtctatgtcgagctgctcggcgggcggcagatcgggctggggctggtcagcgacgtg
acggtggtcgccgcgcagccggcgcaggtgcggacgccctcggtggtgcgtcccgctcgc
gctttttcggcaagcgaggcggaactcatcgcccatgccgcgttcatggggagggtgaag
aacccgatatgggggagcgatgcgtccgcgtga
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