Sphingomonas sp. CL5.1: F9288_05560
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Entry
F9288_05560 CDS
T11042
Symbol
pbpC
Name
(Genbank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00550
Peptidoglycan biosynthesis
spcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F9288_05560 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spcl01003
]
F9288_05560 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spcl01011
]
F9288_05560 (pbpC)
Enzymes [BR:
spcl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
F9288_05560 (pbpC)
Glycosyltransferases [BR:
spcl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
F9288_05560 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
spcl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
F9288_05560 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
CbiG_N
Motif
Other DBs
NCBI-ProteinID:
QKR99177
LinkDB
All DBs
Position
1095681..1097798
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AA seq
705 aa
AA seq
DB search
MGRRGEHWALAAIVAVATLFGLADWFTRPPPLPGYAQVRAAWRPSEAWLYDRNGALLDSS
RVDFATRRLAWTPLDQIAPIARATIVESEDKRFAHHGGVDWLALAGSARDRLSGKRPRGA
STLAMQLAGFLSGNLARPGARGWLDKLRQIRAARGIADDWSRDQILEAYLNMAGFRGEAQ
GIGAAALGLFGKTPAALTRDDALLLAALLPNPQAPAETVARRACALSHDGDCGRFPALAA
SMLGPARSLALDPGLAPHLADRLLRKPGMRVTTTLDIDVQRMAIAALRRQLLGLGATRAR
DGAVIVVDNASGDVLAYVGGIGGNSTSPAVDAANAYRQAGSTLKPFLYAQAIEKGYLTPA
SILDDTPVQLDTASGLYVPQNYDRAFKGPVSARAALAGSLNVPAVRTLLLVGVDPFRDRL
WDTGYRGLVEDGSYYGFSLALGSAEVTLAEQAAGYRSLARGGRWSPLRLRADDPREPPRA
ITTPQAAWIVADMLSDPVARAGTFGLDSALRLPFWAAVKTGTSKAMRDNWCVGFSDRFTV
AVWVGNVEGDAMRAVSGTSGAAPVWRDVMLALEGARGGQEPLPPPGVEARRVTFAGTGEQ
PRREWFLAGTSFAHADVAPAEARRPRIASPVSGSVYALDPDIPRDRQRLAVAVTGAAATH
RLRLDTRDLGAVDSAPLTFPAPGRHQLALVDIAGRTVDRVTFTVR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcggggcgagcattgggcgctggccgcgatcgtcgcggtcgccaccctgttc
ggcctcgccgactggttcacccgcccgccaccgctccccggctatgcacaggtgcgcgcg
gcgtggcggccgtcggaggcgtggctctacgatcgcaacggcgcgttgctcgattcctcg
cgcgtcgatttcgcgacccggcggctggcgtggacgccgctcgaccagatcgcgccgatc
gcccgcgccacgatcgtcgagagcgaggacaagcgcttcgcgcatcacggcggggtggac
tggctcgcgctggcgggatcggcgcgcgaccgcctctccggcaagcgcccgcgcggggcg
agcacgctggcgatgcagcttgccggcttcctctccggcaatctcgcgcggcccggcgcg
cgcgggtggctcgacaagctgcgccagatcagggcggcgcggggaatcgcggatgactgg
agccgcgaccagatcctcgaagcctatctcaacatggcgggctttcgcggcgaggcgcag
gggatcggcgcggcggcgctcggcctgttcggcaagacccccgccgcgctgacccgcgac
gatgcgctgctgctcgcggcgctcctccccaacccgcaggccccggccgagacggtcgcg
cggcgcgcgtgcgcgctgtcgcatgatggcgattgcgggcgcttccccgcgctcgccgcg
tcgatgctggggccggcgcgcagcctagcgctcgatcccggcctcgcgccgcatctcgcc
gaccggctgctgaggaagccggggatgcgcgtcactaccacgctcgacatcgacgtgcag
cgcatggcgatcgcggcgttgcggcggcagctcctcggcctcggcgcgacgcgcgcacgc
gatggcgcggtgatcgtggtggacaatgcgagcggcgacgtgctcgcctatgtcggcggg
atcggcggcaattccacctcgccggccgtggacgccgcgaacgcctatcgtcaggcggga
tcgacgctgaagcccttcctctacgcgcaggcgatcgagaaaggctatctcaccccggcc
tcgatcctcgacgacacgccggtgcagctcgacaccgcctccggcctctacgtgccgcag
aattacgaccgcgcgttcaaggggccggtctccgcgcgcgcggcgctggcggggtcgctc
aacgtgccggcggtgcgcaccctgctgctggtcggcgtcgatccgttccgcgatcgcttg
tgggacacgggctatcgcgggctggtggaggacggctcctattacggcttcagcctcgcg
ctcggatcggcggaggtgacgctggcggagcaggcggcgggctatcgcagcctcgcgcgc
ggcgggcgctggtccccgctgcggctgcgcgccgacgatccgcgcgagccgccgcgcgcg
atcaccacgccgcaggccgcgtggatcgtcgccgacatgctctccgatcccgtggcgcgt
gccggcaccttcgggctggattcggcgctgcgcctgccattctgggcggcggtgaagacg
ggcacgtcgaaagcgatgcgcgacaattggtgcgtcggcttctcggatcggttcaccgtc
gcggtatgggtcggcaacgtcgagggcgatgcgatgcgcgcggtttccggcaccagcggc
gcggccccggtgtggcgcgacgtgatgctggcgctggagggcgcgcgcggcgggcaggag
ccgcttccgccgccgggcgtggaggcgcgccgcgtcaccttcgccggcacgggcgagcag
ccgcgccgcgaatggttcctcgccggcacgtccttcgcccatgccgatgtcgccccggcg
gaggcacgccggccgcgcatcgcctcgccggtgtcgggcagcgtctatgcgctcgacccg
gacatcccgcgcgaccggcagcggctggcggtggcggtgacgggcgcggcggcgacgcat
cggctgcggctcgacacgcgcgatctcggcgcggtggattcggcgccgctcaccttcccc
gcgccgggccggcaccagctcgcgctggtcgatatcgccggccgcaccgtcgaccgcgtg
accttcacggtgcgctga
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