Sphingomonas sp. CL5.1: F9288_06115
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Entry
F9288_06115 CDS
T11042
Name
(Genbank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spcl03000
]
F9288_06115
Transcription factors [BR:
spcl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F9288_06115
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_6
Motif
Other DBs
NCBI-ProteinID:
QKS01976
UniProt:
A0A6N0X4Y2
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Position
1214008..1215003
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AA seq
331 aa
AA seq
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MPLAPGAGGVGRLAECQTGHSPPGPSYDPRRGLNGRQDGTKHLVPPDRIPEWIPGVQTLD
SSYQDWSGITLKGYDYDRQSAAIPPMRDYMIVGYGGSPTSMHRTAGRAREEGEVGPGRVS
LLTRAEQSTWAWRDPIQVRHIYLGHEEIETAAQGVFDRDPLSIEISDCVSTEDPLIVNCF
DILGAELKCGEFGQRLMVDAVRSLLAVHLLRHYARIQLPDEQNAGLTAVQRNRIVDLINS
RLDENISLDELARIAGTSPFQFSRRFKVDFGIAPYRYVIRARVAKAQEMLRRRKVPHKVI
AFECGFSDQSHFCRTFRRITGVSPSEYQSKA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgctcccggtgcggggggcgtcggacggctcgccgaatgtcaaacgggacat
tccccgccgggcccgagctacgatccccgcagaggcctgaacggacggcaggacgggact
aaacacctagtgccgccggataggattcccgagtggattccgggcgtgcagaccttggat
tcttcgtaccaggactggagcggcatcaccctgaagggttatgactacgaccgccagtcg
gcagcaatcccgcccatgcgtgattacatgattgtcggctacgggggcagcccgacctca
atgcatcgaaccgccggcagagcacgtgaagaaggggaagtcggccccggtcgggtatcc
ctactgacccgagcggaacaatccacttgggcttggcgcgatccgatccaggtccggcac
atatatcttggtcacgaggaaatcgagaccgcagcgcagggcgtgttcgatcgcgatccg
ctctctatcgagatctctgactgcgtgtcgaccgaagatcccctgatcgtgaactgtttc
gacatacttggagccgaactgaaatgtggcgagttcggccagcggctgatggtggacgcc
gtgcgcagcctgctggctgtgcaccttctgcgccactacgccaggattcagctgcccgac
gagcagaatgccgggcttacagctgtgcaaaggaaccggatcgtcgacctgatcaattcg
cgactggacgagaatatcagcctcgacgaactcgcccgcattgcgggcacgagccccttc
cagttctcgcgcaggttcaaggtcgatttcgggatagccccctatagatatgtcatccgc
gcgcgagtagccaaggcacaggaaatgctgcgccgtcgtaaggtcccacacaaggtcatc
gctttcgagtgcggcttttcggatcaaagccatttctgccgcacatttcggaggataacc
ggcgtgtcgccgagtgaataccagagcaaagcctga
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