Sphingomonas sp. CL5.1: F9288_09120
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Entry
F9288_09120 CDS
T11042
Name
(Genbank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spcl03000
]
F9288_09120
Transcription factors [BR:
spcl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F9288_09120
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF5890
Motif
Other DBs
NCBI-ProteinID:
QKR99780
LinkDB
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Position
complement(1866056..1867003)
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AA seq
315 aa
AA seq
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MAVEQHVDNRVGSVAVAEAGALAVIRGVHDYAEHTLRASSEGLGWQHLFMLDFHEPPFSA
AFPGAKDHLLLFLRRGSVRVTTTVAGARRETTFYAGQLNLVPARAEVAVTTGDEVDCLHL
YVSAGIVAEVAGELRGTADVELVPRLGLQDQLLGGLVQACATEMHVPTKRSSAYVEHLSW
ALAAQLVQTCSDRVPAPHAAFDGHIPLNKLRAVEEFVLTHLENDIGVADMARVAGYGPVR
FGRLFRKAVGVPPYRYIQERRVEAVRNALYSPARLADIATATGFCNQEHMTRVFREFHGI
TPGRYRRINTGRDID
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgagcagcatgtcgacaatcgcgtcggatcggttgccgtcgccgaggccggc
gcgctggcggtcattcgcggtgttcacgattacgccgagcacacgctgcgcgcgagcagc
gaggggctgggctggcagcatctgttcatgctcgatttccacgagccgccattctcggcg
gcgtttccgggcgcgaaggatcatctgctcctgttcctgcggcgcggcagcgtcagggta
accaccaccgtagcgggcgcgcggcgcgagacgaccttctacgccggccagctcaatctg
gtgcccgcgcgggcggaggtggccgtcacgaccggcgacgaagtcgattgccttcatctt
tacgtgagcgccgggatcgtcgcggaagtcgccggcgagttgcgcggcaccgccgatgtg
gagctggtgccccggctcggcctgcaggaccagttgctcggcggtctcgtgcaggcctgc
gcgaccgagatgcacgtgcccaccaaacgctcctcggcctatgtcgagcatctttcctgg
gcattggcggcgcagctcgtccagacctgttcggaccgcgtgcccgcgcctcacgccgct
ttcgacggacacattccgctgaacaaattgcgcgcggtggaggagttcgtgctgacacat
ctggaaaatgacatcggcgtcgcggacatggcgcgggtggcgggttatggcccggtgcgg
ttcggccgcctgtttcgcaaggccgtcggcgtcccgccctatcgctacatccaggagcgc
cgcgtcgaggcggtgcgcaacgcgctatattcccccgcccggctggccgacatcgcgacc
gcgacgggcttctgcaaccaggagcatatgacgcgcgtgttccgcgagtttcacggcatc
acccccggccgctatcgccggatcaacacgggcagggatatcgactag
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