Sphingomonas sp. CL5.1: F9288_09205
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Entry
F9288_09205 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_09205
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_09205
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QKR99797
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Position
complement(1887899..1890268)
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AA seq
789 aa
AA seq
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MSASRKALFLISTMTLSAPATAWAQDRAPADQSAPAQGEPAQAGLQEVVVTAQQRGENLQ
KAAVPVAVVSGDDLLNSGIRGIDTLGKLVPSLVVAAGGQGNLIFIRGVGNFSFVASSDPA
AAYNFDGVYVGRSSATFGTFYDLERVEVLKGPQGTLYGRNATAGALNILPVQPRLGENSG
YASASYGSHNEVQAEGAVNVGLGENAAFRLSGLYTHHDGYLRDGTQTDDSAGVRAQLKVA
LTPSLTVRIEGDYAQQRGVGGGSDYVARYALNPLTGQFVATPSGLPLGDGLFTPEAQAYR
AANGTAGRLAGRFLDPLANRPFQRNDVYGIATHIDWKTPIGTFSIIPAWRHARKDNLNTE
SAQQVGNTQDANQYSVEARLVGSSGRLVDYILGAYYFSEQIDDDVHNSAGSVANFNKGRF
TTHSPSFYGRLTLHATDWLRFTGGARYTEDHKRYFDAVNTALSVVCTVPAACPTAPLLPY
TRIMAQQPFVPAVSGSAVVAAPGVLVSRSDTFPGGALNTSKVTYRAAVEIDAGPRSLLYA
SVESGYRAGGFNAFNAYNPENITAYTIGSKNRFLDNRLQLNVEAFYWKYKDQQLTYFGID
PTGRLGIITANVGKSTIKGVEVEGRALVTPTTMLNANVQYLDAGYDRFTYLSPAPVFTGC
PVTPSGALYQVNCSGRPALNSPKWTVNLGVRQTIPLGGNQLVLDADTQYRSGRYTGFDYI
PQEYVDHSWVSNASISFGMKDGKYVIGAFVRNIENNRPQVYGTTVPASNLIVSIIAPPRT
YGVRLSTKF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttcacgcaaggctttgttcctgatctcgaccatgaccctgtcggcccccgcg
accgcctgggcgcaggaccgggcgcctgcggatcaatccgcgcccgcgcagggcgagccg
gcgcaggcggggttgcaggaagtcgtcgtcaccgcccagcagcgcggtgaaaatctccag
aaggcggcggtgccggtcgcggtggtttccggcgacgacctgctgaattcgggcattcgc
ggcatcgacacgctcggcaagctcgtgccctcgctggtggtggcggccggcggccagggc
aatctgatcttcatccgcggcgtcggcaacttctcgttcgtcgccagcagcgatcccgcc
gccgcctataatttcgacggcgtctatgtcgggcggtccagcgcgacgttcggcaccttc
tacgatctcgaacgggtcgaggtgctgaaggggccgcagggcacgttatacgggcgcaac
gccacggcgggcgcgctcaacatcctgcccgtccagccccggctgggcgagaattccggt
tatgcctcggccagctacggcagccataacgaggtccaggcggagggcgcggtcaatgtc
ggtctcggcgagaacgccgcgttcaggctttccggcctttacacgcaccacgacggctat
ctccgcgacggcacccagaccgacgattccgccggcgttcgcgcgcaactgaaggtcgcg
ctgacgccgtcgctcaccgtgcggatcgagggcgattacgcacagcagcgcggcgtgggc
ggcggctccgactatgtcgccagatatgcgctcaatccccttaccggccagttcgtcgcc
actccttcgggcctgccgctcggcgacggcctgttcaccccggaggcgcaggcctatcgc
gcggcgaacggcacggcgggcaggctggcggggcgtttcctggacccgctcgccaatcgt
ccgttccagcgcaacgacgtgtacgggatcgcgacgcatatcgactggaagacgccgatc
ggcacgttcagcatcatcccggcgtggcgccacgcgcgcaaggacaacctcaataccgaa
tcggcgcaacaggtcggcaatacgcaggacgcgaaccaatattcggtcgaggcccgtctg
gtcggcagcagcgggcgactggtcgattatatcctgggcgcatattatttcagcgagcag
atcgacgacgacgtgcacaattcggccgggtccgtcgcgaacttcaacaagggccgtttc
accacccattcgccctcgttctacggccgcctgacgctccacgcgaccgactggctgagg
ttcacgggcggcgcgcgatatacggaggatcacaagcgctatttcgacgcggtgaacacg
gcgctttccgttgtctgcaccgtcccggccgcttgcccgaccgcgccgctcctgccctat
acccgcatcatggcgcagcagccgttcgtccccgcggtgagcgggagcgcggtggtcgcc
gcgccgggcgtgctggtctcgcgttcggatacctttcccggcggcgcgctgaatacgagc
aaggtgacctatcgcgcggccgtggagatcgacgccgggccccggtcgttgctctacgcc
agcgtcgagagcggctatcgcgcgggcggcttcaacgccttcaacgcctataacccggag
aatatcaccgcttatacgatcgggtcgaagaaccgtttcctcgacaatcgcctccagctc
aacgtcgaggccttctactggaaatacaaggatcagcagctcacctatttcggcatcgat
ccgaccgggcggctgggcatcatcaccgcgaacgtcgggaaatcgacgatcaagggcgtg
gaggtcgagggccgcgcgctggtgacgccgaccacgatgctgaacgcgaacgtgcaatat
ctggacgccggctacgaccgcttcacctatctttcgccggcgccggtgttcaccggctgc
cccgtcacgccctccggcgcgctgtatcaggtcaattgctcgggccgcccggcgctcaac
tcaccgaaatggacggtcaatctcggcgtgcggcaaaccattcccctcggcggcaaccag
ctggtgctggacgcggacacgcaataccgctccggccgctacaccgggttcgattatatc
ccgcaggaatatgtcgatcatagctgggtgtcgaacgcgtcgatctcgttcggcatgaag
gacggcaaatatgtgatcggcgcctttgtccgcaatatcgagaacaaccgtccgcaggtc
tatggcaccaccgtccccgcctccaacctgatcgtgtcgatcatcgccccgccacgcacc
tatggcgtgcgattgtcgacgaagttctga
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