Sphingomonas sp. CL5.1: F9288_11505
Help
Entry
F9288_11505 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_11505
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_11505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF5754
Motif
Other DBs
NCBI-ProteinID:
QKS00183
LinkDB
All DBs
Position
complement(2366801..2368807)
Genome browser
AA seq
668 aa
AA seq
DB search
MKTSYVSLLAIVIAGQAHAEDMAAVDAAAGDDVVVTASRSGDAIPLDLIGSSVTVIDDRE
MQDRQTRIVADVLRDVPGVAVNRNGAIGGLIDIRIRGAEANQTLVFIDGIKAENPYSGTY
DFGTLLNDEASRIEVLRGQQSSLYGSDAIGGVITYTTLSGREKPGYSLRAEGGSMGTFSG
GARAGGVVGDQFDYALTTSYYQTDGYPVAPGGKLDVGSDNLGASAKLNWTPAANFKLTAV
GRYSLTHADLNDQQIAPTSPIVQGYPVITAIDTPGDTARNRGWYGLVGATWSLFDDAWTN
AATAAITDNRRDFDGPYGPSGDVGRRYRATFDSTVRFGSDHVKNRFTLAMDYERQEFRNT
TAYADQSTHVLETRGYVASYDVTVDDRLALGASARIDDYNRFRDAATYRATASYLLPGGT
RFHAAYGTGIKAPTPGELFGYTSGLYIGNPALRPEQSKGWEAGVEQSLLDRSVTIGATYF
NNIFTDQIDTTYVYDSGSGTYIQQSYNQSGRTRQEGVEVYASARVSDFRLDASYTYLNAP
QTIDALAGPAPGDGSFQFPVPITGQAVRRPKDVASFNATYAPKSLPLTATLTVRYNGRQR
DYAFNSDYSRLLVDLKAYTLVNFNASYDIGAHVQVFGRVENLLDRKYQEVFTYNAPGRAA
YGGVRVTF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccagttatgtttcgttgctggcgatcgtcatcgccggtcaggcccatgccgag
gatatggcggccgtggacgcggcggcgggcgacgatgtcgtcgtcaccgccagccgctca
ggcgacgcgatcccgctcgacctgatcggctcgtcggtcaccgtgatcgacgatcgggag
atgcaggaccgccagacgcgcatcgtcgccgacgtgctgcgcgacgtgccaggcgtggcg
gtcaaccgcaacggcgcgatcggcgggctgatcgatatccgcatccgcggcgccgaggcc
aatcaaaccctggtgttcatcgacggcatcaaggccgaaaacccctatagcggcacctat
gacttcggcacgctgctcaacgacgaggcgtcgcggatcgaggtgctgcgcggccagcaa
agctcgctctacggctcggacgcgatcggcggcgtcatcacctacaccacgctctcgggc
cgcgagaagccgggctattcgctccgcgccgagggcggttcgatgggcaccttctccggc
ggcgcgcgtgccggcggcgtggtcggcgaccagttcgattatgcgctcacgaccagctat
taccagaccgacggctatcccgtggcgcccggcgggaagctcgacgtcggctccgacaac
ctgggcgcgtcggcgaagctgaactggacgcccgcggccaatttcaagctgaccgccgtc
ggccgctacagcctcacccacgccgatctcaacgatcagcagatcgcccccacctcgccg
atcgtgcagggctatccggtcatcaccgcgatcgacacgccgggcgacacggcgcgcaat
cgcggctggtacgggctggtcggggcgacgtggagcctgttcgacgacgcctggaccaac
gccgccaccgctgcgatcaccgacaaccggcgtgacttcgacggcccctacggcccgtcc
ggcgacgtcggtcgccgctaccgcgcgaccttcgacagcacggtgcgcttcggcagcgac
catgtgaagaaccgcttcacgctggcgatggattacgagcggcaggaattccgcaacacc
accgcttatgccgaccagagcacgcacgtcctcgagacccgcggctatgtcgccagctat
gacgtgacggtggacgatcgcctcgcgttgggcgcctccgcgcggatcgacgactacaac
cgcttccgcgatgccgcgacctatcgcgcgaccgccagctatctcctgcccggcggcacg
cgcttccacgcggcctacggcaccggcatcaaggcgccgacgccgggcgaattgttcggc
tatacgagcggcctctacatcggcaatcccgcgctgcggccggaacagtcgaagggctgg
gaagcgggcgtcgagcagtcgctgctggacaggtcggtgacgatcggcgcgacctatttc
aacaacatcttcaccgaccagatcgacacgacctacgtctatgattccggcagcggcacc
tatattcagcagagctacaaccagagcggccggacgcggcaggagggcgtcgaagtctat
gcctccgcgcgggtttccgatttccggctggacgcgagctacacctacctgaacgcgccg
cagacgatcgacgcgctcgccgggccggcgccgggcgacggcagcttccagttcccggtg
ccgatcaccggccaggcggtccgccggccgaaggacgtcgcctcgttcaacgccacctat
gcgccgaagtccctgccgctgaccgccacgctgaccgtccgctacaacggccgccagcgc
gattatgccttcaattccgactattcgcgcctgctggtggacctgaaggcctatacgctc
gtcaatttcaacgcgagctacgacatcggcgcgcatgtccaggtcttcggtcgcgtggag
aacctgctcgaccggaaatatcaggaggtgttcacgtacaacgcgcccggccgcgcggcc
tatggcggcgtgcgcgtgacgttctga
DBGET
integrated database retrieval system
