Sphingomonas sp. CL5.1: F9288_11720
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Entry
F9288_11720 CDS
T11042
Symbol
hemB
Name
(Genbank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00860
Porphyrin metabolism
spcl01100
Metabolic pathways
spcl01110
Biosynthesis of secondary metabolites
spcl01120
Microbial metabolism in diverse environments
spcl01240
Biosynthesis of cofactors
Module
spcl_M00868
Heme biosynthesis, animals and fungi, glycine => heme
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
F9288_11720 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spcl04147
]
F9288_11720 (hemB)
Enzymes [BR:
spcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
F9288_11720 (hemB)
Exosome [BR:
spcl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
F9288_11720 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QKS02104
UniProt:
A0A6N0X9M6
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All DBs
Position
2413840..2414832
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AA seq
330 aa
AA seq
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MHASFPALRLRRTRIADWSRRLHRETVLTPADLIWPLFITEGQGVEEPIASLPGVSRWSV
DGIVARAREARDLGIPCLALFPYTPPALRTDDGREALNPDNLMCRAIRAIKDAVPEVGVL
TDVALDPYTAHGHDGLVDAGGYVLNDATVEVLVGQSLNQAAAGADIIAPSDMMDGRIGTI
RAALEGAGHINVQIMAYAAKYASAFYGPFRDAVGSRGLLKGDKKTYQMDHANAEEALREV
AMDLAEGADSVMVKPGLPYLDIVCRVKEAFAVPVFAYQVSGEYAMIEAAAAAGAGDRDAL
VLETLLAFRRAGCSGILTYHAAHAARLLAG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatccttccccgcgcttcgccttcgccgtacccgcatcgccgactggagccgc
cgcctgcatcgcgagacggtgctgactcccgccgacctgatctggccgctgttcatcacg
gaggggcagggggtggaggagccgatcgccagcctgcccggcgtgtcgcgctggtcggtc
gacggcatcgtcgcgcgcgcgcgcgaggcgcgcgatctcggcattccttgcctcgccctg
ttcccctatacgccgcccgcgctgcgcaccgacgacgggcgcgaggcgctcaacccggac
aatctgatgtgccgcgcgatccgcgcgatcaaggacgcggtgccggaggtgggggtgctg
accgacgtcgcgctcgacccctataccgcgcacgggcatgacgggctggtcgatgcgggc
ggctatgtgctcaacgacgcgacggtggaggtgctggtcggccagtcgctcaaccaggcg
gcggcgggggcggacatcatcgctccgtcggacatgatggatggccgcatcggcacgatc
cgcgccgcgctggagggcgcggggcacatcaacgtgcagatcatggcctatgccgccaaa
tacgccagcgccttctacggcccgttccgtgacgcggtgggcagtcgcgggctgctgaag
ggcgacaagaagacctaccagatggatcacgccaatgccgaggaggcgctgcgcgaggtg
gcgatggacctcgcggagggcgcggacagcgtgatggtgaagccgggcctgccttatctc
gacatcgtatgccgcgtgaaggaggcgttcgcggtgccggtgttcgcttatcaggtgtcc
ggcgaatatgcgatgatcgaggccgccgcggcggcgggcgcgggtgatcgcgacgccctg
gtgctggagacgctgctggccttccgccgcgcgggttgttccggcattcttacctatcat
gcggcccatgccgcgagattgctggccggatga
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