Sphingomonas sp. CL5.1: F9288_12035
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Entry
F9288_12035 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_12035
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_12035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF6735
Motif
Other DBs
NCBI-ProteinID:
QKS00272
LinkDB
All DBs
Position
complement(2482551..2484710)
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AA seq
719 aa
AA seq
DB search
MSNRIFTSRIAIAVALITPGAAWAQDATRAAQTQAQSDDQSGIQDIVITAQHREERLQDV
PIAVTAVSGDSLARSGVTDTRQLTQSMPSVVFSRVNSSFQPYIRGVGTRNANIGDESNVS
LYIDGVYQPVMSSLGFDLVNVERIEVLRGPQGTLFGRNSTGGLINIITPDPTQELSGSVV
ARVGSYGEKSLQGYISTGIAPGVSIDLTGSIGGDTGYIKDLVNGGYRGDRSSEVARAKIL
IEPTANFRMVLTGNYTRYADSSSVSEQPFRGNSTGARAPVPILPTGPWQTAIDTPTNAKS
KTYSASLQTRLTLESFNIETMSAYINSKAVSITDSDATTKPIGSVIAPQSSYYIENEIRA
LSTGDSAFSWIVGAFQLSGKGSFDGLESYANGALVSRTFTRQEVVSYAGFGEGTLRFGPV
SLIAGARYSTEKRNYEAHTATAIAVPFRESSNNKVTYRFSAQYKFSPSANVYASYSRGFK
SGVYNGFATTVAAASPTRPETIDSYEIGFKTDPLNWLRINGSLFHYDYTDIQQSARDPVT
TLVLLFNAASAKVDGAELEATVRVSRNFNIRGYGTYLRAKYDSFPTAQIFRPMPTLGNSS
IAPYDASGKDMIRAPRSTVGVNFDWSHDTDVGTFGVAGNIFHSAKYYWDFENRLTQPAYT
MINGDISFSPAGMDNLRLSVFVRNLANEVVYSQMTSTATADKAGFERPRTFGASAAFKF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatcgcattttcaccagcaggattgcaatcgcagtggcgctgatcacgccaggt
gcggcgtgggcgcaggatgcaacgcgcgccgcgcagacccaagcgcaatcggacgaccag
agcggcatccaggacatcgtcatcactgcgcaacaccgcgaagagcgcctgcaggacgtg
ccgatcgcagtcactgcggtgagcggcgatagcctggctcgctcgggcgtgaccgacacg
cgccagctgacccagtcgatgccctccgtggtcttcagccgcgtcaattcgagcttccag
ccctatatccgcggagtcggcacgcgaaacgccaatatcggcgatgagtcgaacgtctcg
ctctacatcgacggcgtgtatcagccggtgatgtcgtcgctcggcttcgacctcgtcaac
gtcgagcggatcgaagtgctgcgtggtccacagggaacactcttcggtcggaactccact
ggcggattgatcaacatcatcacgccggaccctacgcaagaactgtcgggcagcgttgtc
gcccgggtcggtagctatggtgagaaatcgctccagggctatatctcgaccggcatcgcg
cccggcgtcagtatcgacctgaccggcagcatcggtggtgataccggctatatcaaggat
ctggtcaacggcggctatcgcggcgatcgctcctcggaagtggctcgcgccaagattttg
atcgagccgaccgccaatttccgcatggtgctgaccggcaactacacccgctacgccgat
tcctcgtcggtcagcgagcagcccttccgtggcaactcgacgggcgcccgcgcgcccgtg
ccgattctgcccaccggtccatggcagacggcgatcgacacgcccacaaacgccaagtcc
aagacctattccgcatcgctgcagacccgactgaccctcgagagtttcaatatcgagacc
atgtctgcctatatcaacagcaaggccgtatccatcaccgacagcgatgcgacgacaaag
ccgatcggttcggtaatcgcgccgcagagttcctattatatcgaaaacgagatccgtgcg
ctttcgaccggcgatagtgcattctcctggatcgtcggcgcatttcaactctcaggcaaa
ggctcgttcgacgggctggagagctatgcgaacggcgcactcgtaagccgcacgttcacg
cgacaagaggtcgtgtcctacgcaggcttcggtgaaggaacgctgcggttcggccctgtc
tcgctgatcgccggcgcgcgctacagcacggaaaagcgcaactatgaggcgcacacggcg
actgctatcgccgtgcccttccgcgagtcgagcaacaacaaggtaacctaccgcttctcg
gctcagtataaattcagccccagcgccaatgtctacgcaagctacagccgcggtttcaag
agcggcgtctataacggcttcgcgacgaccgtggccgccgcgtcgcccacgcgtcctgaa
acgatcgactcgtacgaaattggcttcaagaccgatccgctcaactggctgcgcattaac
ggctcgctgttccattatgactatacggacatccagcaatcggcgcgtgacccggtcacc
acgctggtgctgcttttcaacgcggcatccgccaaggtcgatggcgccgagctcgaagcc
acagttcgggtgagccgcaacttcaatatccgcggctacggtacctatctccgcgccaag
tatgacagcttcccgaccgcccagatcttccgtccaatgcctacgctgggtaactcttcg
atcgctccatatgatgcctcaggcaaggacatgatccgcgcgccccgctccacggtaggc
gtcaatttcgattggtcgcatgatacggacgtgggcaccttcggcgtagccggaaatatc
ttccactccgccaaatattattgggacttcgaaaaccgcctcacccagcccgcatacacc
atgatcaacggcgatatctcgttctcgcctgctggtatggacaatctgcgcttgagcgta
ttcgtgcgaaaccttgccaacgaggtagtgtattcgcagatgacgtccaccgcgacggca
gataaggccgggttcgagcgtccgcggacatttggtgcctcggctgccttcaagttttga
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