KEGG   Sphingomonas sp. CL5.1: F9288_12765
Entry
F9288_12765       CDS       T11042                                 
Name
(Genbank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
spcl  Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spcl03032]
    F9288_12765
   03036 Chromosome and associated proteins [BR:spcl03036]
    F9288_12765
   03400 DNA repair and recombination proteins [BR:spcl03400]
    F9288_12765
DNA replication proteins [BR:spcl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F9288_12765
Chromosome and associated proteins [BR:spcl03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F9288_12765
DNA repair and recombination proteins [BR:spcl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F9288_12765
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QKS00397
UniProt: A0A6N0X1S6
LinkDB
Position
2630870..2631145
AA seq 91 aa
MNNNDLAEALAASNGITKANARKYVDDMFAAIAAAAAKGDEIALSGFGKFKVKRTEARDG
RNPSTGETIKIAASNKLTFAPAKAVKDRLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
gtgaacaataatgacctcgccgaggcgcttgccgcgtccaacggcatcaccaaggccaac
gcccgcaaatatgtcgacgacatgttcgccgcgattgccgccgccgcggccaagggcgat
gagatcgccttgtcgggcttcggcaagttcaaggtgaagcgcaccgaggcgcgcgacgga
cgcaatccgtcaaccggcgagacgatcaagatcgccgcgtcgaacaagctgaccttcgcg
cccgcgaaagcggtcaaggaccggctaaacggctga

DBGET integrated database retrieval system