Sphingomonas sp. CL5.1: F9288_12765
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Entry
F9288_12765 CDS
T11042
Name
(Genbank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spcl03032
]
F9288_12765
03036 Chromosome and associated proteins [BR:
spcl03036
]
F9288_12765
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_12765
DNA replication proteins [BR:
spcl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
F9288_12765
Chromosome and associated proteins [BR:
spcl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
F9288_12765
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
F9288_12765
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QKS00397
UniProt:
A0A6N0X1S6
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All DBs
Position
2630870..2631145
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AA seq
91 aa
AA seq
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MNNNDLAEALAASNGITKANARKYVDDMFAAIAAAAAKGDEIALSGFGKFKVKRTEARDG
RNPSTGETIKIAASNKLTFAPAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaataatgacctcgccgaggcgcttgccgcgtccaacggcatcaccaaggccaac
gcccgcaaatatgtcgacgacatgttcgccgcgattgccgccgccgcggccaagggcgat
gagatcgccttgtcgggcttcggcaagttcaaggtgaagcgcaccgaggcgcgcgacgga
cgcaatccgtcaaccggcgagacgatcaagatcgccgcgtcgaacaagctgaccttcgcg
cccgcgaaagcggtcaaggaccggctaaacggctga
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