Sphingomonas sp. CL5.1: F9288_14720
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Entry
F9288_14720 CDS
T11042
Symbol
carB
Name
(Genbank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00220
Arginine biosynthesis
spcl00240
Pyrimidine metabolism
spcl00250
Alanine, aspartate and glutamate metabolism
spcl01100
Metabolic pathways
spcl01110
Biosynthesis of secondary metabolites
spcl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
F9288_14720 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
F9288_14720 (carB)
00220 Arginine biosynthesis
F9288_14720 (carB)
Enzymes [BR:
spcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
F9288_14720 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
MucBP_2
DUF6716
Motif
Other DBs
NCBI-ProteinID:
QKS00735
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All DBs
Position
3058504..3061836
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AA seq
1110 aa
AA seq
DB search
MPKRTDISSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPEL
ADATYVEPITPEVVARIIEKERPDAVLPTMGGQTALNTALALFRDGTLEKFGVTMIGADA
EAIDKAEDRLKFRDAMDKIGLESARSAIAHTEAEALAGLDKVGLPAIIRPSFTLGGTGGG
VAYNREEFIEIVRKGLDASPTTEVLIEESLLGWKEYEMEVVRDRADNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEPVLSTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFNQVDRLVGAPRA
EIEAALAVATPDRLLVAAQALREGFTVAEVHAIAKYDPWFLERIAEIVAAEEEVCRQGLP
IDAAGMRRLKAMGFSDKRLAWLALQSANLRGMERGIARGSGLVHDAVVAMTGGVTEDEVR
ALRHRLGVRPVFKRIDTCAAEFDARTPYMYSTYEAPSFGEPENEAQPSDRRKIVILGGGP
NRIGQGIEFDYCCCHACFALADAGFETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LYVEQSKGELVGVIVQFGGQTPLNLARALEKAGIPILGTSPDAIDLAEDRERFAALVGRL
NLLQPANGIARSREEALIVAERVGYPVLMRPSYVLGGRAMEIVDGPAQLEDYIQTAVQVS
GDAPVLIDQYLRDAIEVDVDAICDGDDVVVAGVLQHIEEAGVHSGDSACSIPPYSLPPEV
IAEIERQTEALARGPEVRGLMNIQFAVKDGKVYLIEVNPRASRTVPFVAKAIGAPIAKIA
SRVMAGEKLRDLPKIDRAIDYFAVKEAVFPFNRFPGIDPVLSPEMKSTGEVMGIAKDFTT
AFAKSQLGSGTILPSTGAAFVSVKDGDKAHIVPAVRDLVAAGFTIVATGGTADHLAAAGL
PVERVNKVAQGRPHIVDRIKDGGIDLIFNTTEGWQSLKDSQPIRAAALGQKIPYFTTAPA
SVEAARAIARSALRDLEVRPLQSYYSQSHN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatctcctccatcctcgtcatcggcgcggggccgatcgtcatc
ggtcaggcgtgcgagttcgattattcgggcacgcaggcgatcaaggcgctgaaggaagag
ggctatcgcatcgtcctggtcaattcgaacccggctacgatcatgaccgatcccgaactg
gccgacgccacctatgtcgaaccgatcacgccggaagtggtcgcgcggatcatcgagaag
gagcggcccgacgccgtgctcccgacgatgggtgggcagaccgcgctcaacaccgcgctg
gcgctgttccgggacggcacgctggagaaattcggcgttacgatgatcggcgccgacgcc
gaggcgatcgacaaggccgaggatcgcctcaagttccgcgacgcgatggacaagatcggc
ctcgaatccgcgcgctcggcgatcgcgcataccgaggccgaggcgctggcggggctggac
aaggtcggcctgcccgcgatcatccgtcccagcttcacgctcggcggcacgggcggcggc
gtcgcctataaccgcgaggagttcatcgagatcgtccgcaagggcctcgacgcctcgccg
accaccgaggtgctgatcgaggaatcgctgctcggctggaaggaatatgagatggaggtg
gtccgcgaccgcgcggacaattgcatcatcatctgctcgatcgagaatgtcgatccgatg
ggcgtccataccggcgactcgatcaccgtcgcgccggcgctgacgctgacggataaagaa
tatcagatcatgcgcaacgcgagcatcgcggtgctgcgtgaaatcggcgtggaaacaggc
ggttcgaacgtgcagttcgcggtcaatccgaaggatggccggctcgtcgtgatcgagatg
aacccgcgcgtcagccgctcgtcggcgctggcatcgaaggccaccggcttcccgatcgcc
aaggtcgcggcgaagctggcggtgggctatacgctcgacgagatcgaaaacgacatcacc
ggcgcgacgcctgccagcttcgagccgacgatcgattatgtcgtcaccaagatcccgcgc
ttcgccttcgagaagttcaagggcgcggagccggtgctctccaccgcgatgaagtcggtg
ggcgaggtgatggcgatcgggcgcaacatccacgaatcgatgcagaaggcgctgcgcggg
ctggagacggggctttccggcttcaaccaggtcgatcgcctcgtcggcgcgccgcgcgcg
gagatcgaggcggcgctggcggtcgcgacgccggaccggctgctggtcgcggcgcaggcg
ctacgcgagggcttcaccgtggcggaggtccatgcgatcgcgaaatacgatccgtggttc
cttgagcggatcgcggaaatcgtcgcggccgaggaggaggtgtgccggcagggcctgccg
atcgacgcggccgggatgcggcggctgaaggcgatgggcttctccgacaagcggctcgca
tggctggcgctgcaatcggcgaacctgcgcgggatggagcgcggcatcgcgcgcggctcg
ggcctcgtccacgacgcggtggtggcgatgaccggcggcgtcaccgaggacgaagtgcgc
gcgctgcgccaccgtctcggcgtgcgcccggtgttcaagcggatcgacacctgcgcggcg
gagttcgacgcgcgcacgccctatatgtattccacctacgaagcccccagcttcggcgag
ccggagaatgaagcgcagccgtccgaccggcgcaagatcgtcatcctcggcggcgggcct
aaccggatcgggcaggggatcgagttcgattactgctgctgccacgcctgctttgccttg
gccgacgccggtttcgagacgatcatggtcaattgcaaccctgagacggtgagcaccgat
tacgacacctccgaccgcctctatttcgagccgctgacggcggaggacgtgctggagatc
ctgtacgtcgagcagtcgaagggcgaactggtcggcgtgatcgtgcagttcggcgggcag
accccgctcaacctcgcgcgcgcgctggagaaggcgggcattccgatcctcggcacctcg
ccggacgcgatcgacctcgccgaggatcgcgagcggttcgcggcgctggtcggccggctc
aacctgctccagcccgccaatggcatcgcgcgcagccgcgaggaggcgttgatcgttgcc
gagcgggttggctatccggtgctgatgcggcccagctatgtgctcggcggtcgcgcgatg
gagatcgtcgacgggccggcacagcttgaggattatatccagactgccgtgcaagtgtct
ggcgacgcgccggttttgatcgaccagtatctccgcgacgcgatcgaggtagacgtggac
gcgatctgcgacggcgacgacgtggtggtcgccggcgtgctccagcatatcgaggaagcc
ggggtccattcgggcgacagcgcctgctcgatcccgccgtattcgctgccgccggaagtg
atcgccgagatcgagcggcagaccgaggcgctcgcgcgggggccggaggtgcgcgggctg
atgaacatccagttcgcggtgaaggacggcaaggtctatctgatcgaggtgaacccgcgc
gcgtcgcgcaccgtgccgttcgtcgccaaggcgatcggtgcgcccatcgccaagatcgcc
agccgcgtgatggcgggcgagaagctccgcgacctgccgaagatcgaccgtgcgatcgac
tatttcgcggtgaaggaggcggtgttcccgttcaaccgcttccccggcatcgatccggtg
ctgtcgccggaaatgaagtcaaccggggaagtgatggggatcgctaaggatttcaccacc
gccttcgccaagtcgcagcttggctcgggcaccatcctgccttcgacgggggcggcgttc
gtcagcgtcaaggacggcgacaaggcgcatatcgtgccggcggtgcgcgatctggtcgcg
gcgggcttcaccatcgtcgcgactggggggacggccgatcaccttgccgccgccgggctg
ccagtggagcgggtgaacaaggtggcgcaggggcggccgcatatcgtcgaccggatcaag
gacggcgggatcgacctgatcttcaacaccaccgaaggctggcagagcctgaaggattcg
cagccgatccgcgccgcggcgctggggcagaagatcccgtacttcaccactgcaccggct
tcggtggaggccgcccgggcaatcgcgcgttccgccttgcgtgatcttgaagtcaggccg
ttgcagtcttattattcgcagtcgcacaattga
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