Sphingomonas sp. CL5.1: F9288_14860
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Entry
F9288_14860 CDS
T11042
Symbol
aspS
Name
(Genbank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F9288_14860 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spcl01007
]
F9288_14860 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spcl03016
]
F9288_14860 (aspS)
03029 Mitochondrial biogenesis [BR:
spcl03029
]
F9288_14860 (aspS)
Enzymes [BR:
spcl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
F9288_14860 (aspS)
Amino acid related enzymes [BR:
spcl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
F9288_14860 (aspS)
Transfer RNA biogenesis [BR:
spcl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F9288_14860 (aspS)
Prokaryotic type
Other AARSs
F9288_14860 (aspS)
Mitochondrial biogenesis [BR:
spcl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
F9288_14860 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QKS02165
LinkDB
All DBs
Position
3085554..3087374
Genome browser
AA seq
606 aa
AA seq
DB search
MHAYRSHTCAQLAAANVGEAVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADSDSPALP
VLESLRAESVVTIDGNVKKRSDATINPNLATGEIEVFATGVTVQSMAQELPMPVAGEAEY
PEEIRLRYRFLDLRRETLHANIMLRSSVIASIRRRMIDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSYVTQEDVFAAIEPVLHGVFEEFADWQGKGRSVSPLPFRRIPYRESMLKYGNDKPDLRN
PILISDVSAHFAGSGFGRFASIVEAGDVVRAIPAPKTAEKSRKFFDDMNAWAQSEGFAGL
GYATRKQGEWGGPIAKNHGEDKMNALADALGLGPEDGIFFAAGKEAQAAKLAGLARTRVG
EQLDLVDQNRFEFCWIVDFPMFEYDEDAKKIDFSHNPFSMPQGELEALETKDPLDILAYQ
YDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYTRADVDTNFAGMINAFKYGAPPHGGSAP
GIDRIVMLLADQPNIREVIVFPMTQKAEDLMMGAPSFVSAKQLRELNLRSTAEVANVDKA
VAPDAG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttatcgttcccacacctgcgcccagcttgccgccgcgaacgtcggggaggcc
gtccgcctttccggctgggtccaccgcaagcgcgatcatggcggcgtgctgttcgtcgat
ctgcgcgatcattacggcatcacgcagatcgtcgcggacagcgattcgcccgcgctgccg
gtgctggaatcgctgcgcgccgaatcggtggtgacgatcgacggcaatgtgaagaagcgt
tccgacgccacgatcaacccgaacctcgcgaccggcgagatcgaggtgttcgcgaccggc
gtgaccgtccagtcgatggcgcaggagctgccgatgccggtggcgggcgaggcggaatat
cccgaggagatccgcctgcgctatcgcttcctcgacctgcgtcgcgagacgctgcacgcg
aacatcatgctgcgctcgtcggtgatcgcctcgatccggcggcggatgatcgaccagggc
ttcaccgagttccagacgccgatcctcaccgcctccagcccggaaggcgcgcgcgactat
ctggtgccgagccgcgtccaccccggcaagttctacgcgctgccgcaggcgccgcagatg
ttcaagcagctgctgatggtcgccggcttcgaccgttatttccagatcgcgccgtgcttt
cgcgacgaggatgcgcgcgcggatcgtagcccaggcgaattctaccagctcgatttcgag
atgagctacgtcacgcaagaggacgtgttcgccgcgatcgagccggtgctgcatggcgtg
ttcgaggagttcgccgactggcagggcaagggccgcagcgtgtcgccgctgccgttccgc
cgcatcccgtaccgcgaatcgatgctgaaatacggcaacgacaagccggacctgcgcaac
ccgatcctgatttcggacgtatcggcgcatttcgccggctccggcttcggccgcttcgcc
tcgatcgtggaggcgggcgacgtggtgcgcgcgatccccgcgccgaaaaccgccgagaag
tcgcgcaaattcttcgacgacatgaacgcctgggcacagtcggagggcttcgcgggcctc
ggctatgccacacgcaagcagggcgaatggggcggcccgatcgccaagaaccacggcgag
gacaagatgaacgcgctggccgacgcgctcggcctcggcccggaggacggcatcttcttc
gccgccggcaaggaagcgcaggcggccaagctcgccggcctcgcccgcacgcgcgtcggc
gagcagctcgacctggtcgaccagaaccgcttcgaattctgctggatcgtcgattttccg
atgttcgaatatgatgaggacgcgaagaagatcgacttcagccacaatccgttcagcatg
ccgcagggcgagctggaggcgctggagacgaaggacccgctcgatatcctcgcctatcag
tacgatatcgtctgcaacggcgtcgaattgtcgtccggcgcgatccggaaccaccgcccg
gagatcatgtacaaggcgttcgagatcgcgggctatacgcgcgcggacgtcgatacgaat
ttcgccggcatgataaatgcgttcaagtacggcgcgccgccgcacggcgggtccgcgccg
gggatcgaccgcatcgtcatgctgctcgccgaccagccgaacatccgcgaggtgatcgtc
ttcccgatgacgcagaaggcggaggacctcatgatgggcgcgccgagcttcgtctccgcg
aagcagcttcgcgagctgaacctgcgctccacggcggaggtggcgaacgtcgacaaggcg
gtcgcgcccgacgcgggctga
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