KEGG   Sphingomonas sp. CL5.1: F9288_15415
Entry
F9288_15415       CDS       T11042                                 
Symbol
radA
Name
(Genbank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
spcl  Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spcl03400]
    F9288_15415 (radA)
DNA repair and recombination proteins [BR:spcl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     F9288_15415 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C AAA_16 Lon_C RecA AAA_22 AAA Glyco_hydro2_C5 AAA_30 AAA_5 DUF7125 NACHT nSTAND3 AAA_29 BLH_phosphatase NTPase_1 AAA_14 ATPase_2 DAP3 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: QKS00856
UniProt: A0A6N0X1X3
LinkDB
Position
3198162..3199535
AA seq 457 aa
MAKIQKRFVCQSCGSVTSRWQGQCLDCSEWNTLVEEAPAIVTPFQAKHNLQGGGRAIALV
GLDAEVALPARLASGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAARMALAGAH
VAYVSGEEAADQVRLRARRLGLGAAPVQLAAATSVRDILTTLGQGRPPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGTIAGPRVLEHMVDTVLSF
EGERSHQYRILRAIKNRFGGTDEIGVFAMQSEGLAEVSNPSALFLTQREEGVTGTTVFPA
LEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSSAEVYLNI
AGGYRVQDPAADLAVAAALVSALSERPVPAEAVAFGEIALSGEVRPVAHGALRLKEAGKL
GFERALVPAAIAGEKSELRLAGFRTLGQFVDHMLGRG
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggccaagatccagaagcgtttcgtttgccaatcctgcgggtcggtcacgtcgcggtgg
caggggcaatgcctcgattgctcggaatggaacacgttggtcgaggaggcgccagcgatc
gtcacgccgttccaggccaagcacaacctgcaaggcggcggccgtgcgatcgcgctggtc
gggctggacgcggaggttgcgctgcccgcgcggctggccagcggcatcgcggagctggat
cgcgcgctgggcggcggtttcgtcgaagggtccgcgacgctgatcggcggcgatccgggg
atcggtaagtcgaccttgctgcttcaggcggcggcgcggatggcgctggcgggcgcgcat
gtcgcctatgtctcgggcgaggaagcggccgatcaggtgcggctgcgcgcgcggcggctg
gggctgggcgcggcgccggtgcaactcgccgccgccacttcggtccgcgatatcctgacg
acgctagggcaggggcggccgccagcgctgctcgtcatcgattcgatccagacgatgcac
tccgacctgatcgagggcgcgcccggcacggtcagccaggtccgcgcctccgcgcaggaa
ctgatccgcttcgccaaggagcgcggcacggcgctggtgctggtcggccatgtcaccaag
gacggcacgatcgccggcccgcgcgtgctggaacatatggtcgacacggtgctgtcgttc
gagggcgagcgcagccaccaatatcgcatcctgcgcgcgatcaagaaccgtttcggcggc
accgacgagatcggcgtgttcgcgatgcagtccgagggtctggccgaagtttcaaatcct
tccgcgctgttcctgacacagcgtgaggagggcgtgaccggcaccaccgttttccccgcg
ctggaggggacgcggccggtgctggtggagatacaggcgctggtcgtccggctggcgagc
ggggcgacgccgcgccgggcggtggtcggctgggattccgggcggctggcgatgattctc
gcggtgctggaggcgcggtgcgggctgagcttctcctccgccgaagtctatctcaacatc
gccggtggctatcgcgtgcaggatccggcggcggacctcgcggtggcggcggcgctcgtc
tccgcgctcagcgagcggccggtgccggcggaggcggtggcattcggcgagatcgcgctg
tctggcgaggtgcgccccgtcgcgcatggcgcattgcggctcaaggaggcgggcaagctt
ggcttcgagcgcgcgctggtgcccgccgcgatcgcgggcgagaaaagcgagctgcggctc
gccggcttccgcacgctcggccaattcgttgaccatatgctggggcgcgggtag

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