Sphingomonas sp. CL5.1: F9288_15415
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Entry
F9288_15415 CDS
T11042
Symbol
radA
Name
(Genbank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_15415 (radA)
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F9288_15415 (radA)
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
Lon_C
RecA
AAA_22
AAA
Glyco_hydro2_C5
AAA_30
AAA_5
DUF7125
NACHT
nSTAND3
AAA_29
BLH_phosphatase
NTPase_1
AAA_14
ATPase_2
DAP3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QKS00856
UniProt:
A0A6N0X1X3
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Position
3198162..3199535
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AA seq
457 aa
AA seq
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MAKIQKRFVCQSCGSVTSRWQGQCLDCSEWNTLVEEAPAIVTPFQAKHNLQGGGRAIALV
GLDAEVALPARLASGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAARMALAGAH
VAYVSGEEAADQVRLRARRLGLGAAPVQLAAATSVRDILTTLGQGRPPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGTIAGPRVLEHMVDTVLSF
EGERSHQYRILRAIKNRFGGTDEIGVFAMQSEGLAEVSNPSALFLTQREEGVTGTTVFPA
LEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSSAEVYLNI
AGGYRVQDPAADLAVAAALVSALSERPVPAEAVAFGEIALSGEVRPVAHGALRLKEAGKL
GFERALVPAAIAGEKSELRLAGFRTLGQFVDHMLGRG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatccagaagcgtttcgtttgccaatcctgcgggtcggtcacgtcgcggtgg
caggggcaatgcctcgattgctcggaatggaacacgttggtcgaggaggcgccagcgatc
gtcacgccgttccaggccaagcacaacctgcaaggcggcggccgtgcgatcgcgctggtc
gggctggacgcggaggttgcgctgcccgcgcggctggccagcggcatcgcggagctggat
cgcgcgctgggcggcggtttcgtcgaagggtccgcgacgctgatcggcggcgatccgggg
atcggtaagtcgaccttgctgcttcaggcggcggcgcggatggcgctggcgggcgcgcat
gtcgcctatgtctcgggcgaggaagcggccgatcaggtgcggctgcgcgcgcggcggctg
gggctgggcgcggcgccggtgcaactcgccgccgccacttcggtccgcgatatcctgacg
acgctagggcaggggcggccgccagcgctgctcgtcatcgattcgatccagacgatgcac
tccgacctgatcgagggcgcgcccggcacggtcagccaggtccgcgcctccgcgcaggaa
ctgatccgcttcgccaaggagcgcggcacggcgctggtgctggtcggccatgtcaccaag
gacggcacgatcgccggcccgcgcgtgctggaacatatggtcgacacggtgctgtcgttc
gagggcgagcgcagccaccaatatcgcatcctgcgcgcgatcaagaaccgtttcggcggc
accgacgagatcggcgtgttcgcgatgcagtccgagggtctggccgaagtttcaaatcct
tccgcgctgttcctgacacagcgtgaggagggcgtgaccggcaccaccgttttccccgcg
ctggaggggacgcggccggtgctggtggagatacaggcgctggtcgtccggctggcgagc
ggggcgacgccgcgccgggcggtggtcggctgggattccgggcggctggcgatgattctc
gcggtgctggaggcgcggtgcgggctgagcttctcctccgccgaagtctatctcaacatc
gccggtggctatcgcgtgcaggatccggcggcggacctcgcggtggcggcggcgctcgtc
tccgcgctcagcgagcggccggtgccggcggaggcggtggcattcggcgagatcgcgctg
tctggcgaggtgcgccccgtcgcgcatggcgcattgcggctcaaggaggcgggcaagctt
ggcttcgagcgcgcgctggtgcccgccgcgatcgcgggcgagaaaagcgagctgcggctc
gccggcttccgcacgctcggccaattcgttgaccatatgctggggcgcgggtag
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