Sphingomonas sp. CL5.1: F9288_15860
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Entry
F9288_15860 CDS
T11042
Symbol
miaB
Name
(Genbank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spcl03016
]
F9288_15860 (miaB)
Enzymes [BR:
spcl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
F9288_15860 (miaB)
Transfer RNA biogenesis [BR:
spcl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
F9288_15860 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
DUF6716
IMPDH
DUF6197
Motif
Other DBs
NCBI-ProteinID:
QKS00937
UniProt:
A0A6N0X365
LinkDB
All DBs
Position
complement(3275701..3277029)
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AA seq
442 aa
AA seq
DB search
MSKTPPRTFHVKSFGCQMNVYDGERMAELMAAEGLTATVDAASADLVVLNTCHIREKATE
KVYSDIGRLRKDDPAKMIAVAGCVAQAEGEEIVRRAKVDVVVGPQAYHNLPKLVADAAKG
EAALDTDMPVLSKFDALPARRKVGPTAFLTVQEGCDKFCTYCVVPYTRGAETSRPFGEIV
DEAKALVDAGAREMTLLGQNVNAWSDDDGRGLHDLIRALDRIAGLARIRYTTSHPNDMTQ
ELIDAHRDVEKLMPFLHLPVQAGSDRVLRAMNRSHTRDSYLRVLDRVRAARPDIALSGDF
IVGFPGETEAEFAETLSLIDEVRHAQAFSFKYSPRPGTPAATMDGQIAPEVMDERLQRLQ
EALNRDQLAFNKASVGRRCAVLIERRGKLPGQMLGKSPWLQSVHLQTDAPIGSIVEVELL
SAGPNSLTAREIPSPPVSVAAA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccccgccccggacattccacgtcaagtcgttcggctgccagatgaacgtc
tatgacggcgagcgcatggccgagctgatggccgccgaagggctgaccgcgaccgtcgat
gccgccagcgccgatctggtggtgctcaacacctgccatatccgcgagaaggcgaccgaa
aaggtctattccgacatcggccggctgcggaaggacgaccccgccaagatgatcgccgtc
gccggctgcgtcgcgcaggccgagggtgaggagatcgtgcgccgcgcgaaggtggatgtg
gtggtgggtccgcaggcctatcacaacctgccgaagctggtggcggacgcggcgaagggc
gaggcggcgctcgatacagacatgccggtgctctccaagttcgacgcgctgccagcgcgg
cgcaaggtggggccgaccgccttcctgacggtgcaggaaggctgcgacaaattctgcacc
tattgcgtcgtcccctatacgcgcggcgcggagacgagccggccgttcggcgagatcgtc
gacgaggcgaaggcgctggtcgatgccggcgcgcgcgagatgaccttgctggggcagaac
gtcaacgcgtggagcgacgacgacgggcgcgggctgcacgacctgatccgcgcgctcgac
cggatcgccgggctggcgcgcatccgctacaccaccagccaccccaacgacatgacgcag
gagctgatcgacgcgcatcgcgatgtcgagaagctgatgccgttccttcacctgccagtg
caggccggcagcgaccgtgtgctcagggcgatgaaccgcagccacacgcgcgacagctat
ctgcgcgtgctcgatcgcgtccgcgccgcgcggcccgatatcgcgctgtcgggcgatttc
atcgtcggcttccccggcgagacggaggcggaatttgcggagacgctgagcctgatcgac
gaggtgcgacatgcgcaggcgttcagcttcaaatacagcccccgccccggcacgcccgcc
gcgacgatggacggccaaatcgcgccggaggtgatggacgagcggctccagcggcttcag
gaagcgctcaaccgggatcagctcgccttcaacaaggcatcggtcgggcggcgctgcgcc
gtgctgatcgagcggcgcggcaaattgccgggccagatgctcggcaaatcgccgtggctg
caatcggtgcatctccaaaccgacgcgccgatcggctcgatcgtcgaggtcgagttgctc
agcgccggccccaattcgctcaccgcgcgggaaatcccgtctccgccggtctcggtcgcc
gccgcgtga
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