Sphingomonas sp. CL5.1: F9288_15940
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Entry
F9288_15940 CDS
T11042
Name
(Genbank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03030
DNA replication
spcl03430
Mismatch repair
spcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9288_15940
03430 Mismatch repair
F9288_15940
03440 Homologous recombination
F9288_15940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spcl03032
]
F9288_15940
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_15940
Enzymes [BR:
spcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9288_15940
DNA replication proteins [BR:
spcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9288_15940
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9288_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
AAA_5
AAA_18
AAA_30
NACHT
nSTAND3
Mg_chelatase
AAA_19
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QKS00949
LinkDB
All DBs
Position
3291693..3292643
Genome browser
AA seq
316 aa
AA seq
DB search
MTSLRGNAPARAAFDAAMASGALHHAWLLTGPQGVGKGTFAREAAARLLAQSAGDEGGAR
TRALIEAGSHPDYRELARLAKEERGETRLARSITIAQVRALQPLFATTPSLGPRRVIVID
AIDDLEREGANALLKSLEEPPPGTVFLLVSHAPGRLLPTIRSRCRALRFGLLDESDVREV
LRERAPELRGDELDTLIRAGAGAPGRALRYAGLELAAIDNALAAIARSGDRSNAERARLA
KALSTKAAQPRYEAFLDRAPEFIASHAPGRAGEELRVALDAYEEAQGIAGAARRLSLDAG
ATVFELAGVVARLARM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacttcgcggcaacgccccggcacgcgcggccttcgacgccgcgatggcgagc
ggcgcgcttcatcacgcatggctcctcaccggcccgcagggagtggggaaggggacgttc
gcccgcgaggcggcggcgcgcctgctcgcacaatcagcgggtgacgaaggcggcgcacgg
acgcgcgcgctgatcgaggccggctcgcaccccgattatcgtgagctggcccggctggcg
aaggaggagcgcggcgagacacgtctggcgcgcagcatcacgatcgcgcaggtccgtgcg
ctccagccgttgttcgccactacaccctcgctcgggccgcgccgcgtgatcgtgatcgac
gcgatcgacgacctcgagcgggaaggggccaacgccctgctcaagagcctggaggaaccg
ccgcccggcaccgtcttcctgctcgtcagccatgcgccgggccggctgctgccaacgatc
cgctcgcgctgccgcgccctgcgtttcgggctgctcgacgaaagcgacgtgcgtgaggtg
ctgcgtgagcgggcgccggagctgcgcggcgacgaactggacacgctgatccgcgccgga
gcaggcgcaccggggcgggcgctgcgttatgccgggctggaacttgccgcgatcgacaac
gcgctggccgcgatcgctcgcagtggcgaccgaagcaacgcggagcgcgcgcggctcgcc
aaggcgctgtcgaccaaggccgcacagccgcgttacgaggccttcctcgatcgcgcgccg
gaattcatcgcttcccacgcgccggggcgcgccggcgaggagttgcgcgtggcgctcgat
gcctatgaagaagcgcagggaatcgcgggcgcggcgcggcggctgtcgctcgatgcgggg
gcgaccgtattcgagctggcgggggtggtcgcacggcttgcgcggatgtag
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