KEGG   Sphingomonas sp. CL5.1: F9288_15980
Entry
F9288_15980       CDS       T11042                                 
Name
(Genbank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
spcl  Sphingomonas sp. CL5.1
Pathway
spcl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F9288_15980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spcl02022]
    F9288_15980
Two-component system [BR:spcl02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   F9288_15980
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 FleQ AAA B12-binding AAA_22 VpsR AAA_16 OKR_DC_1_N
Other DBs
NCBI-ProteinID: QKS00957
LinkDB
Position
complement(3299053..3300423)
AA seq 456 aa
MALDILVVDDELDIRELVAGVLEDEGYETRVAADSDAALEAIATRRPSLVLLDVWLQGSR
LDGLQLLDEIKRRDASIPVLMISGHGNLDTAVAAIRAGAVDFIEKPFQAERLLLMVERAT
ETERLRREVASLRASAGHDTDLTGNSSAINAVRATLKRVAGTGSRILITGPAGVGKEIAA
RLLHGWSPRAGSPFVIVSAARMTPERVEEELFGVEEGGDLVRTGLLEQAHGGTLFLDEIA
DMPIATQARILRVLTDQSFTRVGGTRQVKVDVRVVSATARDLTAEIAEGRFREDLYYRLN
VVPVTLPPLAERREDIPVLIEHFVAHYAAERRVPTPEVAVDAMVALQSYDWPGNVRQLRN
VVERTIILAPGDRIGRIDLDLLPAEVLGENEGAASTAAIMGAPLREARETFEREYLRVQI
RRFSGNISRTATFIGMERSALHRKLKLLGITETREE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggccctcgatatcctcgtcgtcgatgacgaactcgacatccgcgaactggtcgccggc
gtgctggaggacgagggctatgaaacccgcgtcgccgccgacagcgacgccgccttggag
gcgatcgccacacgccgcccgagcctcgtgctgctcgacgtatggctgcaagggtcgcgg
ctggatgggctgcaattgctcgacgagataaagcgccgtgatgcctcgatcccggtgctg
atgatttccggccacggcaatctcgatacagcggtggcggcgatcagggcgggcgcggtg
gatttcatcgaaaagccgttccaggccgaacgcctgctgctgatggtcgagcgcgcgacc
gagacggagcgactgcgtcgcgaggtggcgtcgctgcgcgcctcggccgggcatgacacc
gatctcaccggcaattcgagcgcgatcaacgcggtgcgcgcgacgctcaagcgggttgcc
ggcaccggcagccgcatcctgatcaccggtccggcgggcgttggcaaggagatcgccgcg
cgcctgcttcacggctggagtccgcgtgccggctcgccattcgtgatcgtcagcgcggcg
cgcatgacacccgaacgcgtcgaggaggaattgttcggcgtggaggaggggggcgatctc
gtccgcaccggtctgctcgagcaggcgcatggtggcaccctgttcctcgacgagatcgcg
gacatgccgatcgcgacgcaggcgcgcatcctacgcgtgcttaccgaccagagcttcacg
cgggtggggggcacgcggcaggttaaggtcgatgtccgcgtcgtatccgccaccgcgcgc
gacctaacggccgaaatcgccgagggcaggttccgcgaggatctctactatcggctcaac
gtcgtgccggtgacgctgcccccactggctgagcggcgcgaggatatccccgtgttgatc
gagcatttcgtcgcccattacgccgctgagcgtcgtgtgccgacgcccgaggtcgcagtc
gatgcgatggtcgcattgcaaagctacgactggcccggcaacgtccgccaactgcgcaac
gtggtcgagcgcaccatcatcctcgcgccgggcgaccggatcggacggatcgacctcgat
cttctgcccgccgaggtgctgggcgagaatgagggcgcggcgagcactgccgcgatcatg
ggcgcgccgctgcgcgaggcgcgcgagacgttcgagcgcgaatatctgcgcgtccaaatt
cggcgcttttcgggcaatatctcccgcaccgcgaccttcatcggaatggagcgatccgcg
ctgcaccgaaagttgaagctgctcggcatcaccgaaacgcgcgaagaataa

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