Sphingomonas sp. CL5.1: F9288_16840
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Entry
F9288_16840 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_16840
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_16840
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QKS02199
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Position
complement(3492132..3494441)
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AA seq
769 aa
AA seq
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MPAVAQTADAAPAAVADIIVTANKREQKLSDVGSTVAVLGGDALAARQINDLKDIAQAVP
GLSFANSENGTPILTLRGVGFIESSLAAYPTVSVYVDEAPLPFGALAVHSAYDLERVEVL
KGPQGTLFGQNSTGGAINFIAAKPTDELSAGGNLTYGRFNEANGEAFVSGPLSSTLKARV
SGRVETMDGWQISNSRPNDRNGKVRNYMGRLLIDWEPTSGARFSLNVNGWKDKSDTEAPQ
YIGYVQQNPIANPIIPTVPFSPATPRAADWGGPVAGFVPFGDSDFWQASLRGDIDLADHV
TLTSLTSYLQFNQRQGADRDGLPYTVNDLISDGSIRSFFQELRLSNGASRPFRWVVGGNY
SNNKVDQVADFDYRYTSVNETVFTVFGYNLDRAHYSNYQKLTSFAFFANGEYDLASTLTF
KAGARYTKAQSSATICNTDLTGDPKGTGPFLYDVVFGGAYGTFHAGDCFAGNDLGATING
VPPGAPGQYKDTLTEDNVSWMAGLDYKPRPGLLFYANVSRGYKAGSFPAVSATSFVQYRA
VKQESVTAYEAGAKASLLDGALQVNAAGFYYDYLNKQLRSKVQSFFGIQDALVNVPKSSI
KGFELEFTLRPTHGLTFANGFTWLDAKIDRFTGISGGGLPADFADTRMPFAPKYQLSSNL
DYEFPISDRLKAFVGASANMRSDTIAVVGGDVNAANAIPSTFKLQGIDGYVLVDARAGIA
SADGRWRVSVFGKNIFNQYYWNNAITSSDAVARFAGMPATYGVSLSFRL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgtcgcccagaccgccgacgccgcgccggccgccgtcgccgatatcatcgtc
accgccaacaagcgcgagcagaagctttccgacgtcggttcgaccgtcgcggtgctcggc
ggcgacgcgctggcggcgcgacagatcaatgacctcaaggatatcgcgcaggccgtgccc
ggcctgtcgttcgccaattcggagaacggcacgccgatcctcacgctgcgcggcgtcggg
ttcatcgaatcctcgctggcggcctatccgaccgtctcggtctatgtcgacgaggcgccg
ttgccgttcggggcgctggcggtgcattcggcctatgaccttgagcgggtcgaggtgctg
aaaggaccgcagggcacgttgttcggccagaactccaccggcggcgcgatcaacttcatc
gccgccaagccgaccgacgagctttccgccgggggcaacctcacttatggccggttcaac
gaggccaatggcgaggcgttcgtcagcggcccgctcagcagcacgctcaaggcccgtgtc
tccggccgcgtcgagacgatggacggctggcagatcagcaacagtcgcccgaatgaccgc
aacggcaaggtgcgcaattacatgggccgcctgctgatcgactgggagccgacgtccggc
gcgcgcttcagcctcaacgtcaacggctggaaggacaagagcgataccgaggcgccgcaa
tatatcggctatgtccagcagaacccgatcgccaacccgatcatccccaccgtgcccttt
tcgccggccacgccgcgcgcggccgactggggcgggccggtggcgggcttcgtgccgttc
ggcgacagcgatttctggcaggcgtcgctgcgcggcgacatcgaccttgccgatcacgtc
acgctgacctcgctcacctcttacctgcaattcaaccagcggcagggtgcggatcgcgac
ggcctgccctatacggtgaacgacctcatcagcgacggctcgatccgcagcttctttcag
gaattgcggctgagcaacggcgcgtccaggccgttccgctgggtggtcggcggcaattat
tccaataacaaggtcgatcaggtcgccgatttcgattatcgctatacgtcggtcaacgaa
acggtgttcaccgtattcggttacaacctcgatcgcgcgcattacagcaattaccagaag
ctcacgagcttcgcctttttcgcgaacggtgaatacgatcttgccagcacgctgaccttc
aaggccggcgcgcgctacaccaaggcgcagagcagcgcgacgatctgcaacaccgatctg
accggcgacccgaagggaaccgggccgttcctctacgatgtggtgttcggcggcgcctat
ggcactttccatgccggggattgtttcgcgggcaacgatcttggcgcgacgatcaacggc
gtgccgcccggcgcgccgggccaatataaggatacgctgaccgaggataacgtctcgtgg
atggcgggcctggattacaagccgcggcccggcctgctgttctatgccaacgtcagtcgc
ggctacaaggcgggcagcttcccggcggtgtcggcgaccagcttcgtccagtatcgcgcg
gtgaagcaggaatcggtcaccgcatatgaagcgggcgccaaggcgtcgctgctcgacggc
gcgttgcaggtgaatgccgccggcttttattatgattatctgaacaagcagcttcgctcg
aaggtgcagtccttcttcggcatccaggatgcgctggtcaacgtgccgaaatcgtcgatc
aagggcttcgaactggagttcacgttgcgtccgacccatgggctgactttcgccaacggc
ttcacctggctcgacgcgaagatcgatcgcttcaccgggatcagcggcggcgggcttcca
gccgacttcgccgatacgcggatgccgttcgcgccgaaatatcagctttcctcgaacctc
gactatgaattcccgatatccgaccggctgaaggcgttcgtcggcgcgagcgcgaacatg
cgttcggatacgatcgcggtggtcggcggcgacgtgaatgccgcgaacgcgatcccgtcg
acctttaagttgcagggcatcgacggctatgtgctggtcgacgcccgcgccgggatcgcc
agcgcggacggccggtggcgggtgtcggtgttcggcaagaatatcttcaaccaatattat
tggaacaacgcgatcacgtcgtccgacgctgtggcgcggttcgccgggatgcccgccacc
tacggcgtcagcctgtcgttccggctgtag
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