Sphingomonas sp. CL5.1: F9288_17340
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Entry
F9288_17340 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_17340
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_17340
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QKS01195
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Position
complement(3606258..3608108)
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AA seq
616 aa
AA seq
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MAPSAALAQSPEGAGTDDVVVTASIIGEGVPRDLIGGSITTLSADDLEQRGTRQLADVLR
DVPGVEVSRSGCLGCTTQVRLRGAEANHTLVLVDGIDLASPVSREADFSTMLGEDGARVE
VLRGQQSALYGSQAIGGVIQYFTPDGRTSPGVRARLEYGSFNTFSGNLQAGGSSGKADYI
ASFTAYDSDGTTDTRTGTRDLGYWNYTLSGKAHYAFSDTVRLFGVVRWNRNRSDFNSGSD
SDGALIDTPGNYATAENLVGRLALQVDALGGRWSNNLSVEGLDARSSSYSFGSPYTSRGT
RVKTAFVTAIAFGDDHIKHKLTASVDYQHETFEQVYDAARHDLDTIGLVGVYDLVVDEDT
AFSASVRNDSNNRFKSFTSYRVQATHSFPTGTRLRAAAGSGIQYPTQFELFGYSGTFLAN
PGLRPEKSEGWEAGIEQKLLGKAILIGATYFSNVLTDKISSMGFPVSTPVNLAGRAHQKG
VEAFANIHLADGLAIDAAYTYLDSTDGVPPTQTVRRARNIASANVNWSAPGDRLRLNLNV
RYNGSQFDNAFPPAPPYQVLERLAPYTVVNVNAEYRLGEKFTLFVRADNLFDERYEEVWS
YVAPGRLVSGGVKARF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccgcggcgctggcgcaatctcccgagggggcaggcacggacgatgtcgtc
gtaacggcgtcgatcatcggtgagggcgtgccgcgcgacctgatcggcggctcgatcacc
accctcagcgcggacgatctcgagcagcgcgggacgcgccagctcgccgacgtgctgcgc
gacgtgcccggcgtcgaggtcagccgctcgggctgcctcggctgcaccacccaggtccgg
ctgcgcggcgcggaggcgaatcacacgctggtcctcgtcgacggcatcgatctcgccagc
ccggtctcgcgcgaggccgatttctccacgatgctcggcgaggacggcgcgcgggtcgag
gtgctgcgcggccagcagagcgcgctttacggatcgcaggcgatcggcggcgtgatccag
tatttcaccccggacggcaggacctcgccgggcgtgcgcgcgcggctggaatatggctcg
ttcaacaccttctccggcaatctccaggccggcggatcgagcggaaaggcggactatatc
gcgagcttcaccgcgtacgacagtgacgggacgaccgacaccaggaccggcacccgcgac
ctgggctattggaactacaccctgtcgggcaaggcgcattatgcgttcagcgacaccgtc
cggctgttcggcgtggttcgctggaacaggaaccggagcgacttcaacagcggcagcgac
agcgacggcgcgctgatcgacacgccgggcaattacgccaccgccgaaaatctcgtcggg
cggctcgcgctgcaggtcgacgcgctgggcggacgctggtcgaacaacctctcggtcgag
gggctggacgcgcgaagctcgtcctattccttcgggtcgccctacacgtcgcggggcacg
cgcgtgaaaaccgccttcgtcacggcgatcgcgttcggcgacgatcacataaagcacaag
ctgacggcatcggtcgattaccagcacgagacgttcgagcaggtttacgacgcggcccgg
catgatctcgacacgatcggcctcgtcggcgtctatgatctcgtcgtcgacgaggacacc
gccttcagcgcttccgtgcgcaacgacagcaacaaccgcttcaagagcttcacgagctac
agggtgcaggcgacgcacagcttcccgaccggcacgcggctgcgcgccgccgccggaagc
ggcatccagtatccgacgcagttcgagctgttcggctattccggcacgttcctcgccaat
ccgggcctgcgaccggaaaagtcggaaggctgggaggccggcatcgagcagaagctgctc
ggcaaggcgatcctgatcggcgccacctatttctcgaatgtcctcaccgacaagatctcg
tcaatgggctttccggtttcgaccccggtcaacctcgccggcagggcgcaccagaaaggc
gtggaggctttcgccaacatccatctggcggacgggctggccatcgacgccgcctacacc
tatctcgacagcaccgacggcgtgccgcccacgcaaaccgttcgccgcgcccggaacatc
gccagcgcgaacgtcaactggagcgcgcccggcgaccggctgcgcctcaacctgaacgtg
cggtacaacggctcccagttcgacaatgcctttccgcccgcgccgccctatcaggtgctc
gagcggctggcgccctatacggtggtcaacgtcaatgccgaataccggctcggcgagaag
ttcacgctgttcgtccgcgccgacaacctcttcgacgagcgctacgaggaggtctggtcc
tatgtcgcgcccggccggctggtgtcgggcggcgtgaaggcgcgcttttga
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