Sphingomonas sp. CL5.1: F9288_18170
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Entry
F9288_18170 CDS
T11042
Name
(Genbank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F9288_18170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spcl03400
]
F9288_18170
DNA repair and recombination proteins [BR:
spcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F9288_18170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QKS01339
UniProt:
A0A6N0X560
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Position
3776950..3777708
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AA seq
252 aa
AA seq
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MRPTPSIIRVIDLETTGPAPPQHGVCEIGWQDVALGADGRWELSGDGGNRMVNPGRLMPP
ITQAIHHIRDEDVADAPWWHDVARQVLDPWPRRVALAAHRADFEQVFCTPALTHGAEWIC
TWKCALRLWPDSPSFSNQVLRYWRKPEGLVHERGLPAHRAFPDAYVTAFHLRDMLNEASL
AQLLEWSRLPGLLPRVRYGPDRGKDWREIDEDSLIGFLTDRDPDIRFTAETEMARRHGGG
NVGRPSPQDLLL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccacgccaagcatcatccgcgtcatcgatctcgaaaccaccggccccgccccg
ccccagcatggggtgtgcgaaatcggctggcaggacgtggcgctcggtgccgacggtcga
tgggaactgtcgggcgatggcggcaaccgcatggtcaatcccggccgtctcatgccgccg
atcacgcaggcgatccatcacatccgcgacgaggatgtcgccgacgcgccatggtggcat
gacgtcgcgcggcaggtgctcgatccatggccacgccgcgtcgcgctcgccgcgcatcgg
gcggatttcgagcaggtgttctgcacccccgcgctgacccacggcgcggaatggatctgc
acctggaaatgtgcgctcaggctatggccggattcgccgagcttctccaatcaggtgctg
cgctactggcgcaagccggaagggctggtccatgaacgcgggctacccgcgcaccgcgcc
ttccccgacgcctatgtcaccgccttccacctgcgcgacatgctgaacgaggcgagcctt
gcgcagctcctcgaatggtcgcgcctgccggggctgctgccgcgcgtgcgctacgggccg
gatcgcggcaaggactggcgcgagatcgacgaggacagcctgatcggtttcctcaccgat
cgcgatcccgacatccgcttcaccgccgagaccgagatggcgcggcggcacggcggcggc
aatgtcggtcgccccagcccgcaggacctgctgctgtag
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