Sphingomonas sp. CL5.1: F9288_19185
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Entry
F9288_19185 CDS
T11042
Symbol
rpsA
Name
(Genbank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
F9288_19185 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spcl03011
]
F9288_19185 (rpsA)
Ribosome [BR:
spcl03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
F9288_19185 (rpsA)
Bacteria
F9288_19185 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
QKS01511
LinkDB
All DBs
Position
3993053..3994762
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AA seq
569 aa
AA seq
DB search
MASTATPTRDDFAAMLDDMFGGADSFEGRVVHGTVTGIENDMAIIDVGLKSEGRVPLREF
AAPGQKAELKVGDEVEVYVDRVENMHGEAMLSRDRARREAAWDNLEAEFAKTARVEGVIF
GRVKGGFTVDLNGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRKRGNIVVSRRAV
LEETRAEQRSGLIQSLHEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRVAHPSE
MINIGDTVRVQIIRINKDTQRISLGMKQLESDPWDGVGAKYPVGAKLSGRVTNITEYGAF
VELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVVVLEVDEDKRRISLGLKQAQANP
WEAFAAAHPIGSTVEGEVKNATEFGLFVGLDNDVDGMVHMSDIAWGVSGEDALALHRKGE
MVQAIVLDIDPEKERISLGMKQLERGGPVVGAATGGERLSKNAVVTVTILEVRDAGLEVQ
AGDDGATGFIKRTDLGRDRDEQRPERFQVGQKLDAMVTGFDRSKKPTFSVKAMQIAEEKQ
AVAQYGSSDSGASLGDILGEALKARESKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcaacccccacccgggacgatttcgcggcgatgctcgatgacatgttc
ggcggcgccgacagcttcgagggccgcgtggtgcacggcaccgtcaccggcatcgaaaat
gacatggcgatcatcgatgtcggcctcaagagcgaaggtcgcgtgccgctgcgcgagttc
gccgcccccggccagaaggccgagctgaaggtcggcgacgaggtcgaggtctatgtcgat
cgcgtcgagaacatgcacggcgaagcgatgctgtcgcgcgaccgcgcgcgccgcgaggcc
gcctgggacaatctggaagccgaattcgccaagaccgcgcgcgtcgagggcgtgatcttc
ggccgcgtgaagggcggcttcaccgtcgacctgaacggcgccgtggccttcctgccgggc
agccaggtcgatatccgcccggtgcgtgacgtcaccccgctgatggatatcccgcagccg
ttccagatcctgaagatggaccgcaagcgcggcaacatcgtcgtctcgcgccgcgcggtg
ctggaggaaacccgcgccgagcagcgttcgggcctgatccagagcctgcacgagggccag
atcatcgacggcgtggtgaagaacatcaccgactacggcgccttcgtggacctgggcggc
atcgacggcctgctgcacgtcaccgatctcagctacaagcgcgtcgcccacccgagcgag
atgatcaacatcggcgacaccgtgcgcgtccagatcatccgcatcaacaaggacacgcag
cgcatctcgctgggcatgaagcagcttgagagcgatccgtgggatggcgtcggcgccaaa
tatccggtcggcgcgaagctgtcgggccgcgtcacgaacatcaccgaatatggcgcgttc
gtggagctggagccgggcatcgagggcctcgtccacgtcagcgagatgtcctggaccaag
aagaacgtccatccgggcaagatcgtctccacctcgcaggaagtggacgtcgtggtgctg
gaggtcgatgaggacaagcgccgcatcagccttggactcaagcaggcgcaggccaatccg
tgggaggcgttcgccgccgcccatccgatcggctcgaccgtcgagggcgaagtcaagaac
gcgaccgagttcggcctgttcgtcggtctcgacaacgacgtcgacggcatggtccacatg
tccgacatcgcctggggcgtttcgggcgaggacgcgctggcgctgcatcgcaagggcgag
atggtgcaggccatcgtgctcgacatcgatccggagaaggagcgcatctcgctcggcatg
aagcagcttgagcgcggcggcccggtggtcggcgcggcgacgggcggcgagcgcctgtcg
aagaacgcggtcgtcaccgtcaccatcctcgaagtccgcgacgccggtctcgaggtgcag
gctggcgacgacggcgcgaccggcttcatcaagcgcaccgacctcggccgcgaccgcgac
gagcagcgtccggagcgtttccaggtcggccagaagctcgatgcgatggtgaccggcttc
gatcgttcgaagaagccgaccttctcggtcaaggcgatgcagatcgccgaggagaagcag
gcggtggcgcagtacggctcgtccgattcgggcgcgtcgctaggcgacatcctgggcgag
gcgctcaaggctcgcgaatcgaagaagtga
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