Sphingomonas sp. CL5.1: F9288_20065
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Entry
F9288_20065 CDS
T11042
Name
(Genbank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F9288_20065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spcl03019
]
F9288_20065
Enzymes [BR:
spcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
F9288_20065
Messenger RNA biogenesis [BR:
spcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F9288_20065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QKS01655
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Position
4179203..4180396
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AA seq
397 aa
AA seq
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MDDVTDGKTMLPAAAWRDRPGLDRLAAALGAAAGEARYVGGAVRDTLLGLDVADIDIATR
HAPAEVIARLKAAGIKAVPTGIEHGTITAVSSGTVVEVTTLRRDVSTDGRRATVAFTDDW
REDAARRDFTMNALYADPLTGELFDWFGGLDDLAAGRVRFIGDPYQRIAEDHLRILRFFR
FHARFGDAIDAEGLAACTDRANDLMALSRERIAAELLRLLVAANAVPVVALMIERGILRP
VLPEITDAAGLAALAAREAAEGLAPDAIRRLAALIAPDAAEGVGARLKLSNADRKRLRAA
HDGPGDEGPRALAYRAGPAIATDRLLLAGESVAALTGWTPPRLPIGGGEIVARGVAKGPE
VARLLRAVEDEWIARGFPDAAETIAIADQLLSSHSSR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgtaaccgacggaaagaccatgcttcccgccgccgcatggcgcgaccggccg
ggcctcgacaggctcgcggcggcgctcggcgcggcagcgggcgaggcgcgctacgtcggc
ggcgcggtgcgcgacacgctgctcgggctggacgtggccgacatcgacatcgccacccgc
catgctcccgcggaagtgatcgcgcggctgaaggcggcgggcatcaaggccgtccccacc
ggcatcgagcatggcacgatcaccgccgtctccagcggcacggtggtcgaggtgacgacc
ctgcgccgcgacgtctccaccgacggccgccgcgccaccgtcgccttcaccgacgactgg
cgcgaggatgccgcgcggcgcgatttcacgatgaacgcgctctatgccgatccgctgacc
ggcgagctgttcgactggttcggcgggctggacgaccttgccgccgggcgcgtgcgcttc
atcggcgacccatatcagcggatcgccgaggatcatctgcgcatcctgcgcttcttccgc
ttccacgcgcggttcggcgacgcgatcgacgccgaggggctggccgcctgcaccgatcgc
gccaacgacctgatggcgctgtcgcgcgagcggatcgcggcggagctgctgcggctgctc
gtcgcggccaatgcggtgccggtggtggcgctgatgatcgagcgcggcatcctccgcccg
gtgctgcccgagatcaccgacgccgccggcctcgccgcgctcgcggcgcgcgaggcggcc
gagggcctcgcgcccgacgcgatccgccgcctcgctgcgctgatcgcccccgatgcggcg
gagggcgtcggcgcgcggctcaagctgtcgaacgccgatcgcaagcgcttgcgcgcggcg
catgacgggccgggcgacgaggggccgcgcgcactcgcctaccgcgccgggccggcgatc
gccaccgaccggctgctgcttgcgggagagagcgtcgcggcgctcacgggctggacgccg
ccgcgcctgccgatcggcggcggcgagatcgtcgcgcggggggtggcgaaaggaccggag
gtcgcgcggctgttgcgcgcggtggaggacgagtggatcgcgcgcggcttccccgacgcg
gcggagacgatcgcgatcgccgatcagttgttgagctcgcacagcagccgatag
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