Sphingomonas sp. CL5.1: F9288_20215
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Entry
F9288_20215 CDS
T11042
Name
(Genbank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00020
Citrate cycle (TCA cycle)
spcl00190
Oxidative phosphorylation
spcl00650
Butanoate metabolism
spcl00720
Other carbon fixation pathways
spcl01100
Metabolic pathways
spcl01110
Biosynthesis of secondary metabolites
spcl01120
Microbial metabolism in diverse environments
spcl01200
Carbon metabolism
Module
spcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spcl_M00149
Succinate dehydrogenase, prokaryotes
spcl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
F9288_20215
00650 Butanoate metabolism
F9288_20215
09102 Energy metabolism
00190 Oxidative phosphorylation
F9288_20215
00720 Other carbon fixation pathways
F9288_20215
Enzymes [BR:
spcl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
F9288_20215
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Thi4
DAO
S-Me-THD_N
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QKS01680
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Position
4219312..4221114
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AA seq
600 aa
AA seq
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MPAAYQIIDHSYDAVVVGAGGSGLRATMGIAESGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWSWHMFDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYVEYFALDLIMENGA
CRGVIALCMEDGSIHRFRSHAVVLATGGGGRVYQSATSAHTCTGDGNGMALRAGLALQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVARSMAME
MREGRGVGPHGEYIYLHLDHIDPKVLHERLPGITETGKIFAGVDLTRQPLPVTPTVHYNM
GGIPTNYHGEVVQLKDGDPDAIVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
RLKDTLKPNTPHNPLPAGSEEQALTRLDHFRNASGGTPTAQIRSEMQRTMQRHCAVFRDS
ALLSEGVQKIEAINKGMADIGITDRSLIWNTDLVETMELDNLMGQAVVTIKGAENRKESR
GAHMHEDYPERDDANWMKHTIATFDGWGGKGGATTLDYRPVHDYTLTDDAEYIKPKKRVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcctatcagatcatcgaccatagctacgacgcggtagtcgtcggcgcgggc
ggctcgggcctccgcgcgacgatgggcatcgcggagagcggcctcaagaccgcctgcatc
accaaggtgttcccgacgcgcagccacactgtcgcggcgcagggcggcatcgcggccagc
ctcggcaacaactcgcccgaccattggtcgtggcacatgttcgacaccgtcaagggttcc
gactggctcggcgaccaggacgcgatcgaatatatggtgcgcgaggcgccggccgcggtt
tacgagctggagcacgctggcgtgccgttcagccgcaacgacaacggcacgatctaccag
cgcccgttcggcgggcacatgcagaacatgggcgaaggcccgccggtgcagcgcacctgc
gccgccgccgaccgcaccggccacgccatgctccacgcactctaccagcagagcctgaag
tatgacgcggacttctacgtcgaatatttcgcgctcgacctcatcatggaaaacggcgcg
tgccggggcgtgatcgcgctgtgcatggaggacggcagcatccaccgcttccgcagccac
gcggtcgtgctggcgacgggcggcggcgggcgcgtctatcagtccgccacctcggcgcac
acctgcaccggcgacggcaacggcatggcgctgcgcgccggcctcgcgttgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggcgcgggcgtgctcatcaccgagggc
gcgcgcggcgagggcggctatctcaccaactccgagggcgagcgcttcatggaacgctac
gccccgtccgccaaggacctcgccagccgcgacgtggtggcgcgatcgatggcgatggag
atgcgcgaggggcgcggcgtcggcccgcacggcgaatatatctacctgcacctcgaccat
atcgatcccaaggtgctgcacgagcgcctgccgggcatcaccgagacgggcaagatcttc
gcgggcgtggacctgacgcgccagccgctgccggtcacgccgaccgtccactacaacatg
ggcggcatcccgaccaactatcacggcgaggtcgtgcagttgaaggacggcgatccggat
gcgatcgtccccggcctgttcgcggtcggcgaggcggcgtgcgtgtcggtgcatggcgcg
aaccggctcggctccaactcgctgatcgacctggtggtgttcggccgcgcgaccggcctg
cgcctcaaggacacgctcaagccgaacacgccgcacaacccgctgccggcaggctctgag
gagcaggcgctcacccggctcgaccatttccgcaatgcgtccggcggcacgcccaccgcg
cagatccgcagcgagatgcagcgcacgatgcagcgtcattgcgcggtgttccgcgattcg
gcgctgctgtcggagggcgtccagaagatcgaggcgatcaacaaggggatggccgatatc
ggcatcaccgatcgctcgctgatctggaacaccgatctggtcgagacgatggaactggac
aatctgatgggccaggccgtcgtgacgatcaagggcgccgagaaccgcaaggaaagccgc
ggcgcgcacatgcacgaggattatcccgagcgcgacgacgccaactggatgaagcacacc
atcgccacgttcgacggctggggcggcaagggcggcgcgacgacgctcgattaccgcccg
gtgcacgattacacgctcaccgacgacgcggaatatatcaagccgaagaagcgcgtttac
tga
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