Sphingomonas sp. CL5.1: F9288_20280
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Entry
F9288_20280 CDS
T11042
Name
(Genbank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spcl02000
]
F9288_20280
Transporters [BR:
spcl02000
]
Other transporters
Pores ion channels [TC:
1
]
F9288_20280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QKS01689
LinkDB
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Position
complement(4232153..4234381)
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AA seq
742 aa
AA seq
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MKRTFGITISLAALAVAQSAAAQDQSAANTGAAQVQDVIVTAQKRSERLQDVPIAVTAIT
AETIQNRRTLDLVDLSNQAPGLQIKSDDNGANPRIFIRGVGVNDFNPATNSAVGIYADGV
YVASPLAQRLAFFDLQQVEVLRGPQGTLYGRNTTGGAINVTSKLPGNEMEADLSAEYGRF
NSVNVQGGASVPLIADKLSVRIAGLYQRDDGYTLNRLTGHYGNNTNRWAVRGTVHFTPSA
NVTDNLVVSTGRSTGGSIWAYNRPLLTEPYQSDSFCAPALYGTAQCMTFMGYTNPSKNLY
QGDYSFEGKDRVNLLTVSNTLTIDLGAASIVSVTGYQHASRNDQEDTDASPIPTITASYI
ARQNTFSQELRLQSNGHTPLRYVIGAYYAHDYLNNNSAYNVLPLLASDDPVADAGQGIGV
FGWPLMQKVDSYAAFGQLDYDLTARLTLTGGLRYSADHKDFHYVSEAANGLVPIFTYDGA
KTFSSFTGKVGVQYRLTPSANIYASYNRGAKSGGFFSGQATDPADIGPYKDETVNAYEVG
AKTDWLNHTLRANISAFYYDYKNLQVYTTVIDPPFTRQLFTNASAARIYGGELELQATPT
RGLTVSLNTAYLNATYRDFKSAGNDYSGNTLPSAPKVSVQGAVDWQHETPLGTLVANTSL
SFRSKVFFDTSNDARLTDQARAFVDARLGIRVARDRLEIGVWGKNVFNETNISDMTPIPT
LGFDVFSVGPPRTYGLYLKARY
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggacttttggaatcaccatctcgctggcggcgctggctgtcgctcaatccgcc
gccgcgcaggatcagtcggcggccaatacgggcgcggcgcaggtgcaggacgtgatcgtc
accgcgcagaagcgcagcgagcggttgcaggacgtgccgatcgccgtcaccgcgatcacg
gctgagacgatccagaaccgccgcacgctcgacctggtggacctgtccaatcaggcgccg
gggcttcagatcaagtcggacgacaatggcgccaacccgcgcatcttcatccgcggtgtc
ggtgtcaacgatttcaacccggcgaccaatagcgcggtcggcatctatgccgacggcgtg
tatgtcgcctcgccgctggcgcagcggctggccttcttcgacctgcaacaggtggaggtg
ctgcgcgggccacagggcacgctctatggccgcaacaccactggcggcgcgatcaacgtc
accagcaagctgcccggcaatgagatggaggccgatctctccgccgaatatggccggttc
aactcggtcaacgtgcaaggcggcgcgagcgtcccgctgatcgccgacaagctctcggtg
cgcatcgcgggcctttaccagcgcgacgacggctacaccctcaaccgcctgaccggccat
tacggcaacaacacgaatcgctgggcggtgcgcggcacggtccatttcacgccgagcgcc
aacgtcaccgacaatctggtggtgagcacgggtcgttcgaccggcggatcgatctgggcg
tacaatcggccgctcctgacggaaccgtatcaaagcgactcgttctgcgcgcccgcgctc
tacggcacggctcagtgcatgaccttcatgggatacacgaatccgagcaagaacctctat
cagggtgattacagcttcgaggggaaggacagggtcaacctgctcaccgtctcgaacaca
ttgacgatcgacctcggcgcggcatcgatcgtatcggtgacgggctatcagcatgcgagc
cgcaacgatcaggaggatacggacgccagcccgatcccgacgatcaccgccagctatatc
gcgcggcagaacacgttcagtcaggaactgcgcctgcaatcgaacggccacacgccgctg
cgctatgtgatcggcgcttattacgcgcacgattatctcaacaacaattcggcctataac
gtgctcccgcttctcgcatcggacgacccggtggcggatgccggacagggcattggcgtg
ttcggctggccgctgatgcagaaggtggacagttacgcggcgttcggccagctcgattac
gacctgaccgccaggctgacgctcacgggcggtctgcgctactcggccgaccacaaggat
ttccactatgtcagcgaggcggcgaacgggctggtgccgatcttcacctatgacggagcg
aagacgttcagttcgttcaccggcaaggtcggggtgcaatatcgcctgacgccgagcgcc
aatatctacgccagctacaatcgcggcgccaagagcggcggtttcttcagcgggcaggcg
accgatccggcggacatcgggccgtacaaggacgagacggtcaacgcctatgaagttggg
gccaagaccgattggctcaaccacacgctacgcgccaatatctcggccttttattacgat
tacaagaatttgcaggtctatacgacggtcatcgacccgccgttcacgcggcagctcttc
accaacgcctccgccgcgcggatctatggcggcgaactggagcttcaggcgacgccgacg
cgcggcctcaccgtgtcgctcaacaccgcctatctcaacgccacttatcgcgatttcaaa
tcggccgggaacgactattcgggcaacaccctgccgtccgcgccgaaggtcagcgtgcag
ggcgcggtcgactggcagcatgagacgccgttgggcacgctcgtcgccaacaccagcctg
tcgttccgcagcaaggtgttcttcgatacgtcgaacgacgcccggctgaccgatcaggcg
cgcgccttcgtcgatgcgcggctcggcatccgtgtcgcgcgggatcggctggaaatcggg
gtgtggggcaagaacgtcttcaacgagaccaatatctcggacatgacgccgatcccgacg
ctcggcttcgacgtgttcagcgtcggtccgccgcgcacttacggcctgtatctgaaggcg
cgttattga
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