Sphingomonas sp. CL5.1: F9288_21035
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Entry
F9288_21035 CDS
T11042
Symbol
murD
Name
(Genbank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
spcl Sphingomonas sp. CL5.1
Pathway
spcl00470
D-Amino acid metabolism
spcl00550
Peptidoglycan biosynthesis
spcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F9288_21035 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F9288_21035 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spcl01011
]
F9288_21035 (murD)
Enzymes [BR:
spcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
F9288_21035 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
spcl01011
]
Precursor biosynthesis
Amino acid ligase
F9288_21035 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Hpf1_C
Motif
Other DBs
NCBI-ProteinID:
QKS01824
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Position
complement(4398634..4399917)
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AA seq
427 aa
AA seq
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MIVSSHWRGRRYAVLGLARTGAATVRALVAGGAQVVAWDSDPARREGFGGVEIADLDNVD
FAGVDALVVSPGVPLNTHPLAARARAIGVPITGDIELFAEARADLPPHKVVGITGTNGKS
TTTALVTHILTTAGIPALMGGNIGLPILAQEPLPAGGVYVLELSSYQIDLTRTLDCDVAV
LLNITPDHLDRYDGFDGYVASKARLFAMQSSEHEAVIGIGDAPSADIARSLSARGEHLTK
IAPGVCLDQSRWPSLKGPHNAHNALAAIAAAKALGVRAADIDRALETFTGLPHRMEKVRE
VAGVAYVDDSKATNPESTAPALGAFPRVHWIVGGRAKGDDLDACRPFFDHVVRAYTIGEA
GPRFAAILKDAMPVDEAGTLAAAVAGAARAAAPGDTVLLSPAAASFDQFRDYEHRGQAFR
EAVEALA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtctcctcccactggcgcggcagacgctatgcggtgctcggcctcgcgcggacc
ggcgcggcgaccgtgcgcgcgctcgtcgcgggcggcgcgcaggtggtggcgtgggacagc
gatccggcgcggcgcgaaggcttcggcggcgtggagatcgcggacctcgacaacgtggat
ttcgcaggggttgacgcgctggtcgtctcgcccggcgtgccgctcaacacgcatccgctg
gcagcgagggcgcgcgcgatcggcgtgccgatcaccggcgacatcgaattgttcgccgag
gcgcgcgcggacctgccgccgcacaaggtggtcgggatcaccgggaccaacggcaaatcc
accaccaccgcacttgtcacccatatcctcacgaccgccggcatccccgcgctgatgggc
ggcaacatcggcctgcccattctcgcgcaggagccgctgccggccggcggcgtctatgtg
ctggagctgtcgagctatcagatcgacctgacgcggacgctggattgcgacgtcgcggtg
ctgctcaacatcacgcccgatcacctcgaccgctatgacggcttcgacggctatgtcgct
tccaaggcgcggctgttcgcgatgcaatcgtcggagcacgaagcggtgatcgggatcggc
gacgcgccttccgccgatatcgcgcggtcgctttcggcgcgcggcgagcatctgacgaag
atcgcgcccggcgtgtgcctggaccagtcgcgctggccgagcctcaagggaccgcataac
gcgcataacgcgctcgccgcgatcgcggcggcgaaggcgctgggggtgagggcggccgat
atcgatcgcgcgctggagactttcaccggcctgccgcaccggatggagaaggtgcgcgag
gtggccggcgtcgcctatgtcgacgacagcaaggcgaccaatcccgaaagcaccgcgccc
gcgctcggcgccttcccgcgcgtccactggatcgtcggcgggcgggcgaagggcgacgac
ctcgacgcctgccgcccgttcttcgatcatgtcgtgcgcgcctatacgatcggcgaggca
gggccgcgcttcgccgcgatcctgaaggacgcgatgccggtggacgaggcggggacgctc
gccgccgccgtggccggcgcggcgcgggcggcggcgccgggcgacacggtgctgctgtcg
ccggcggcggcgtcgttcgaccagttccgtgattacgagcatcgcggtcaggcatttcgc
gaggcggtggaggcgctggcatga
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