Sphingomonas sp. CL5.1: F9288_21195
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Entry
F9288_21195 CDS
T11042
Name
(Genbank) TonB-dependent receptor
Organism
spcl Sphingomonas sp. CL5.1
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Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QKS01848
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Position
4430778..4433465
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AA seq
895 aa
AA seq
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MFTSSSALRHALHSSLALALGAIALAPAASAQEAKQPAVAPAETDVTDQDDVVVTGQALP
GSVIGDIPPENRLTPADIAAYGVDSVSDLLDQISDQTSSIQGRGSSGPVVLVNGKRISGI
NEVGDLPTESIARLDILPEEVALKYGYSATQKVVNIILRRRFRAHVAGAGAGAATDGGGG
NANGDFGITRIHDNERLNVVARAKASAALLESQRGIVADPAAGDPANALASDPDYRTLNP
STRNYSVNGSYAYQISPKLSASLNATAGYQTSRGLAGAAPLSGALDPDEIAALRQDSDAF
TAHGGVTLNYDLSTSWKLSFTGTYDHSDTRGDTDRFQSAAIRDQHITAIGNTAGASVLVS
GPLFSLPGGKVRTSLQFGGNASQLSSTTDRLGGGTTMSNAVTRSTGNAQLSFDVPITSSK
TGFGSAIGTLTANVNGEVNQLSDYGTLGTFGYGLNWTPRTGITVIASVNEDRVAPTLQQL
RGPLLVVPNVRIFDFTNGQTVQVSQITGGNPDLKADDRHVFKLGFSLKPASKLDLTINAN
YLSSRVNNPIGSLSGASLVAQNAFPDRFIRDPETGDLDSIDARPLNFAREEKEQFRWGIV
FSKVLRAATRPAPPPGGWAAWRERQRAAGEAGRGPGQPDAEGGPPPRFRNGAPGAPGDVV
VNGQRRDDGMDNPPPPPPDDMGPPPGGPPPGGPAPGGPPPEGFGGPGGPGGFDHANGHGG
GFGGRGGFRGGFRGGGGNEARLQLSIWHTWSIRDTLVLRDGTQPLDLLAGDTIGAITQPR
HQISFNAGVVDNGVGLRLSGSWRGAATTRTSATPAVGDLHFSSLTTFNLRLFANIQNRVP
HEKWARGLRLSLGVDNIFNSRQRVTDATGATPLAYQPGYLDPLGRTISLSLRKMF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcatcttccgccttgcgccatgcgctccattcgtcgctcgccctcgccctc
ggggcgatcgcgctggcgcccgccgcgagcgcgcaggaagcgaagcagccggccgtcgcc
cccgccgaaaccgacgtgaccgatcaggacgatgtcgtcgtcaccgggcaggcgctgccc
ggctcggtgatcggcgacatcccgccggagaaccgcctgacgcccgccgacatcgcggcc
tatggcgtcgattcggtcagcgacctgctcgaccagatctccgaccagacctccagcatc
caggggcgcggcagcagcggcccggtggtgctggtcaacggcaagcgcatctccggcatc
aacgaggtgggcgacctgccgaccgaatcgatcgcgcggctcgatatcctgccggaggag
gtcgcgctcaaatacggctatagcgcgacgcagaaggtggtgaacatcatcctgcgccgc
cgtttccgcgcgcatgtcgcgggcgcgggcgcgggcgcggcgaccgatggcggcggcggc
aacgccaacggcgatttcggcatcacccgcatccacgacaacgagcggctgaacgtcgtc
gcgcgcgccaaggccagcgcggcgctgctcgaaagccagcgcggcatcgtcgccgatccg
gcggcgggcgatcccgccaacgccctcgcgagcgacccggactatcgcacgctcaacccg
tcgacgcgcaattattcggtcaacggcagctatgcctatcagatctcgcccaagctctcc
gcctcgctgaacgcgaccgccggctatcagacgagccgcgggctggcgggcgccgcgccg
ctttccggcgcgctcgacccggacgagatcgccgcgctgcggcaggacagcgacgccttc
accgcgcatggcggcgtgacgctgaactacgacctgtcgacgagctggaagctgtcgttc
accggcacctacgaccacagcgacacgcgcggcgacaccgatcgtttccagagcgcggcg
atccgcgaccagcacatcacggcgatcggcaacacggcgggcgcgtcagtgctcgtctcc
ggcccgctgttctcgctgcccggcggcaaggtccgcacgtcgctccagttcggcggcaac
gccagccagctcagctccaccaccgaccggctcggcgggggcaccaccatgtcgaacgcc
gtcacgcgctcgaccggcaacgcccagctcagcttcgacgtgccgatcaccagcagcaag
accggcttcggcagcgcgatcggcacgctcaccgccaacgtcaacggcgaggtcaaccag
ctttccgattacggcacgctcggcacgttcggctacgggctgaactggacgccgcgcacc
gggatcaccgtgatcgcctcggtaaacgaggatcgcgtcgcgccgacgctgcaacagctt
cgcgggccgttgctcgtcgtgccgaacgtgcgcatcttcgatttcaccaacgggcagacg
gtgcaggtgtcgcagatcaccggcggcaacccggacctgaaggccgacgaccggcatgtc
ttcaagctcggcttctccctgaagcccgcgtcgaagctcgacctgacgatcaacgccaat
tacctcagcagccgggtgaacaacccgatcggcagcctctccggcgcgagcctggtggcg
cagaacgccttccccgatcgcttcatccgcgatccggagaccggcgatctcgacagcatc
gacgcgcggccgctcaatttcgcgcgcgaggagaaggagcagttccgctggggcatcgtc
ttttccaaggtgctgcgcgccgcaacgcgcccggcgccgccgccgggcggctgggcggca
tggcgcgagcgccagcgcgcggcgggcgaggccgggcgcggccccggccagccggacgcg
gagggtggtccgccgccgcggttccgtaacggtgctcccggcgcgccgggcgatgtcgtg
gtcaacggccagcgccgtgacgacggaatggacaatccgccaccgccgccgcccgacgac
atggggccgccaccgggcggaccaccgcccggtggaccggcgcccggtggaccgccgccg
gaaggcttcggcggaccgggcggtcccggcggcttcgaccatgccaatggccacggcggc
ggcttcggtggccgtggcggctttcgcggcgggttccgtggcggcggcggcaacgaggcg
cggctccagctctcgatctggcacacctggtcgatccgcgacacgttggtcttgcgcgac
ggcacgcagccgctcgacctgctcgcgggcgacacgatcggcgcgatcacccagccgcgt
caccagatctcgttcaacgccggcgtggtcgacaacggcgtcgggctacggctgagcgga
agctggcgcggcgcggcgacgacaaggacctcagccaccccggcggtcggcgacctgcac
ttctcctcgctcaccaccttcaacctgcggctgttcgcgaacatccagaatcgcgtgccg
cacgagaaatgggcgcgcgggctgcggctgtcgctgggcgtcgacaatatcttcaacagc
cgccagcgcgtgaccgacgcgaccggcgcgacgccgctcgcctatcagccgggctatctc
gatccgctcgggcggacgatcagcctgtcgctgcgcaagatgttctga
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