KEGG   Sphingomonas sp. CL5.1: F9288_21360
Entry
F9288_21360       CDS       T11042                                 
Name
(Genbank) type VI secretion protein
  KO
K03200  type IV secretion system protein VirB5
Organism
spcl  Sphingomonas sp. CL5.1
Pathway
spcl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spcl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F9288_21360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spcl02044]
    F9288_21360
Secretion system [BR:spcl02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   F9288_21360
SSDB
Motif
Pfam: T4SS NCF1_PBR_AIR COG2p_C
Other DBs
NCBI-ProteinID: QKS02324
UniProt: A0A6N0XA27
LinkDB
Position
pTSSC1:20803..21513
AA seq 236 aa
MKVIQALAIVGGLAMSMPAFAQGIPVYDSSTFLQTLSTVKNTLSMIEQGKQQISQATELY
NSVNKLTNVNQIASSLNTDAVRHLLPSEARDIQRLMSSDTTGLGSLGTAADRIRSSNRIE
LPELRPDATAFERSNRDSISRNGDMAARDAAIAEAAYGVTAQRTTGLEELRSSLDTASDA
KDVMDIQARVGVENAHIQNDAVQLQALTMRQQAEQRIRSQQESEQILARKLGSLHQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaggtaattcaagcgctggcgattgtcggcggactggcaatgtccatgccggcattc
gcgcaaggcattccggtttatgattccagcaccttcctgcagacgctctcgacggtgaag
aacaccctatcgatgatcgagcagggcaaacagcagatttcgcaggcaaccgagctctac
aacagcgtcaacaaactgacgaacgtcaatcagattgcctcgtccctgaacaccgatgcc
gttcgccacctcttgccgagcgaagcacgcgatattcagcgcctcatgtcatccgacacc
acgggcctcggcagccttgggaccgccgcagatcggatccgtagcagcaaccgtatcgag
cttcccgagctgcgcccggatgcgacggctttcgagcgctcgaaccgcgattccatctcc
cgaaatggtgacatggcggcgcgcgacgcggccattgccgaggcagcgtatggcgtcacc
gcgcagcggacgacgggtctcgaggaactgcgctcgtcgctcgacaccgcgtcagacgcg
aaggacgtgatggatatccaagcccgtgtcggcgtggaaaatgctcatatccagaacgac
gcagtgcaacttcaggctctcacaatgaggcagcaggcggagcagcggattcgatcgcag
caggagagcgagcaaatcttagcaagaaagcttgggagcctacatcaatga

DBGET integrated database retrieval system