Sphingomonas sp. CL5.1: F9288_21610
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Entry
F9288_21610 CDS
T11042
Name
(Genbank) methylase
KO
K26273
protein strawberry notch
Organism
spcl Sphingomonas sp. CL5.1
Brite
KEGG Orthology (KO) [BR:
spcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spcl03036
]
F9288_21610
Chromosome and associated proteins [BR:
spcl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
F9288_21610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKS02363
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All DBs
Position
pTSSC1:complement(70374..74591)
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AA seq
1405 aa
AA seq
DB search
MRTSAAALELDFTEPSITAAKAIHAVLHQGDGLDRPGLLRTMETAYGSTAADGHWSLRDA
YDVLELGQVLHLATLDLPQEPAECLAALTALTASLPTHTVRSEEQIALQQFSTPAAIGYL
ATLAARITAADTVLEPSAGTGLLAVFAARVGAKLVLNEIDPARAAMLEAAFPTAPVSRHD
GELIHDLLPLSIRPTAVLINPPFSRSMGRHADPLAAFRHLRAALKRLGAGGRCAAILPDR
VDTSSRAWTKATEGCAITLHVELPAKAYAKHGTSQVVKLIVLEKSSQDDVALIRCNSLAE
VLAAISTPATSLTATPRCSPVRLAPTRAHRSLLGGLSSRPRLSAPIAKAAPSLGALDIGY
DVFAEPVPTGEAVGVYLPYRPSRIAIPCASAHPTALVESSAMGSITAPRPSYVPKLPTRV
VADRVLSDAQLETLIYAGDAFERDISGLFKAAEEGLSLAPDQDGRPYRTGFFLGDGTGAG
KGRQVAAIILDQWLRGRRKHIWISKTETLLEDARRDWTAVGGLALDIQHLNQWKLGTPIG
AAEGVLFLTYATLRSNRGDKGTRLQQILDWVGDDFDGMLVFDEAHEMASVAGGEGRFGTK
DGSDQGIAGVRLQNLLPRARVLYVSATGASDVNNLAYATRLGLWGPTTAFADRRAFVDSL
RRGGIAAMELIARDLKMQGLYVARALSFAGVEYDILEHRLTPDQVEVYDAYADAWAIIHA
NLRTALDATRVTDSFSNDTYNSGAKAAALSIFESTKQRFFGQILIGMKLPSLIPAIRADL
ARGESVVIQLVSTSESMLNRALAALNAEDRANLDIELSPKEFVMSYLTAAFPVRQMKTFV
DDTGKTRSEPMSDEEGRPIFSQEAIEMRDNLVERFCSLPIVGSALDHIIGHFGSDAVAEV
TGRSRRIVVDAHGRQRIESRSPRTNLAETDAFMRNEKKILIFSDAGGTGRSYHASLTAEN
QSRRNHYLLEPGWRADAAIQGLGRTHRTHQATAPLFRPVSTDCRGERRFISTIARRLDSL
GALTRGQRQTGGQGLFDPRDNLESDYAKESLEAWFRLLADGKLRSTTLDEFQTLTGLELE
GEGGGLKEELPPIQRWLNRILALRIALQNAIFDEYLGLIEARIEAAREAGTLDLGVESIN
AERITILDRTVIRRDQTSGAETEILRLETEERYKPVPLDRALRILGDDARPIVNRKSGRA
AIRCSTYSLTDDDGEIVRRYELVRPTRSERMRQDLLLETMWEETSEKEFSALWQAEVEEM
RDKTRTSTLYLVAGLLLPVWDRLPDDHVQVWRLNTDDGQSFLGRIVPAPLVSKLADAFGI
NAAITVSGDDTAKHVMTTGEISSVGAYRLKRSLVAGQQRLELLDWPHTRLAELKAAGCFT
DIIQHRTRMFVPVAQAAAVIERITA
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacctcagctgctgctctcgaactcgattttaccgaaccatccatcaccgcggcg
aaggcgatccatgccgtgctgcaccagggcgatggcctggaccggcctggcttgctccgg
acgatggaaaccgcctatggttcaaccgcagccgatgggcattggtcactccgcgacgcc
tatgatgtgctggagctgggccaggtcctgcacctcgccacgcttgacctgccgcaagag
ccggctgagtgccttgcagccctgaccgcgctcaccgcatccctgccgacgcataccgtg
cgcagcgaagaacagatcgcgctccagcaattttctacaccggccgcgattggctatctt
gccacgctcgccgctcgcattaccgccgcggataccgtcctggaaccctccgccggcacc
gggctcctcgcggtattcgccgcccgcgttggcgccaagcttgtcctcaacgagatcgat
cccgcgcgtgccgctatgctcgaggcagcatttcccaccgcaccggtcagtcgccacgat
ggcgaactcatccacgatctgctgccgctgtcgatccgcccgaccgccgtgctcatcaac
ccgcccttttcccgcagcatgggcaggcatgccgacccgcttgccgcgttccgtcatctg
cgcgccgccctgaagcggcttggtgccggggggcgctgcgctgctatccttcccgatcgc
gtggatacatcaagccgcgcctggacaaaggcgaccgagggttgcgcgatcacgctccac
gtcgaactgcccgcgaaagcctatgccaaacatggcaccagccaggtcgtgaagctgatt
gttctggaaaaaagctcccaggacgacgtggccctcatccggtgcaactcgctcgccgag
gtgcttgcggcgatcagcacaccggcaacgagccttacggcgacaccgcgatgctcgcca
gtgcgccttgctccaacccgtgcgcacagatccctgctcggcggtctttcgagcaggccc
cggctttcggccccgatcgcgaaggccgccccgtctctcggcgcgctcgatatcggctac
gatgtctttgccgaacccgtaccaaccggcgaagcggtcggtgtctacttgccgtaccgg
ccgagccgcatcgccattccctgtgcatccgcgcatccgaccgctctggtggaatcgagc
gccatgggctcgattacggcaccgcggccctcttacgttcccaagctgcccacccgcgtt
gtcgcagaccgggtgctgtccgacgctcagctcgaaacgctgatctatgccggtgacgcc
ttcgagcgagacatttctggcctgttcaaggcggccgaggaaggattgtcgcttgcgccc
gaccaggacggccgaccttatcggaccgggttcttccttggcgacggcacgggtgccggc
aagggccgtcaggttgcggccatcatcctcgaccagtggctgcgggggcgccgcaagcat
atctggatatccaagaccgagacgctgctcgaggatgcacggcgcgactggaccgcggtt
ggcggtctcgcgctcgacatccagcatctcaatcagtggaaactcggcacgccgatcggc
gcggccgagggcgtgctatttctcacctatgcgacgctgcgctccaaccgcggcgacaag
ggcacccgtcttcagcagattctcgactgggtcggtgacgatttcgacggcatgctggtg
ttcgacgaggcgcacgaaatggcgagtgtcgccggcggcgaaggccgtttcggcaccaag
gacggctccgatcaaggcatcgccggcgtgcgcctgcaaaacctgctgcctcgcgcccgc
gtcctctacgtgtccgcaaccggcgcgtcggacgtcaacaatcttgcttatgccacccgg
cttggcctgtggggtccgaccaccgccttcgccgatcgccgcgccttcgtcgacagtttg
cgtcgtggcgggatcgcggccatggaattgatcgctcgcgacctgaagatgcagggccta
tatgtcgcgagggcgctcagtttcgccggcgtcgaatatgacatcctcgaacatcgcctt
acgcccgaccaggtcgaggtctatgatgcctatgccgatgcgtgggcgattatccacgcc
aatttgcgcaccgcgctcgatgccacccgggtgacggacagcttctccaacgacacctac
aacagcggcgcgaaggccgctgccctgtcgatcttcgaatctaccaagcagcgtttcttc
ggccagatcctgatcggcatgaagctgccgtcgctgatcccggcgattcgtgccgatctg
gcccggggcgagagcgtcgtgatccagctggtctccacgtccgagtcgatgctcaaccgg
gcactggccgcgctgaatgccgaggaccgggcgaatctggacatcgagctttcacccaaa
gagttcgtcatgtcctatctcacggcggcctttcctgtccgacagatgaagaccttcgtc
gatgacaccggcaagacccgctccgagccgatgtccgacgaggagggccgtcccatcttc
agccaggaagcgatcgagatgcgcgacaatctcgtcgagcggttctgctccctgccgatc
gtagggtccgcccttgatcatatcatcgggcatttcgggagcgatgcggtcgccgaggtt
acgggacgcagccggcgtatcgtcgtcgatgcgcacggtcgccagcgtatcgagagccgt
tcgccgcgaacaaacctcgccgaaaccgacgccttcatgcggaacgagaagaagatcctg
atcttctcggatgctggcggcactgggcgcagctatcacgccagcctcaccgccgagaac
cagtcgcgccgcaaccattatctgctcgagcctggttggcgcgctgacgctgccatccag
ggtcttggccgtacccaccgcacgcatcaggcaaccgcgccgctgttccgtccggtatca
acggactgccgcggcgagcggcgcttcatctcgacgatcgcccgccgcctcgacagcctt
ggcgccctgacacggggccagcgccagacgggcggccagggtctgttcgacccgcgggac
aatcttgaaagcgactatgccaaggaatccctcgaggcatggtttcgccttttggccgac
ggcaagctgcgctcgaccacgctcgacgaattccagaccctcaccggacttgagctggag
ggcgaaggcggcgggctgaaggaggagctgccgcccattcagcgctggctcaatcgcatt
ctcgcgctgcggatcgcgctgcagaatgcaatcttcgatgagtatctcggtctgatcgag
gcccggatcgaggcggcgcgcgaagccggcacgctcgatcttggtgtcgagagcatcaat
gccgaacgcatcacgatcctcgatcgcacggtgatccggcgcgaccagacgagcggcgcg
gaaaccgagatcctgcgcctcgaaacggaggagcgctacaagccggtcccgctggaccgc
gcgttgcggatcctcggcgacgacgcgcgcccaatcgtcaatcgcaagtccggcagggcc
gcgatccggtgcagcacctattcgctcaccgacgacgatggcgagatcgttcgccgctac
gagttggttcgaccgacccgttccgagcggatgcggcaagacttgctgctcgaaacgatg
tgggaagagaccagcgagaaggaattttcggcgctgtggcaggccgaggtagaggagatg
cgggacaagacccgcaccagcacgctctatttggtcgcgggcctgctcctgccggtctgg
gatcgcctgcccgacgatcatgttcaggtctggcggctgaacaccgatgacggccagtcc
ttcctcggccggatcgtccctgcaccgctggtgtcgaagctcgcggacgccttcgggatc
aatgccgccatcaccgtgtcgggcgacgataccgcaaagcatgtgatgacgaccggcgag
atatcgtccgtcggagcctaccggctcaagcgcagcctggtcgccggccagcagcgcctc
gaactgctcgattggccgcacacgcggcttgccgaactcaaggcggcaggctgttttacc
gacatcatccagcacaggacgcggatgttcgtccccgtcgcgcaggccgccgccgtcatc
gagcgcatcaccgcctga
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