Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0254
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Entry
SPD_0254 CDS
T00413
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd03030
DNA replication
spd03430
Mismatch repair
spd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPD_0254 (polC)
03430 Mismatch repair
SPD_0254 (polC)
03440 Homologous recombination
SPD_0254 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spd03032
]
SPD_0254 (polC)
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_0254 (polC)
Enzymes [BR:
spd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPD_0254 (polC)
DNA replication proteins [BR:
spd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPD_0254 (polC)
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPD_0254 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DEDDh_C
HHH_3
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABJ54142
UniProt:
Q04MH6
LinkDB
All DBs
Position
251075..255466
Genome browser
AA seq
1463 aa
AA seq
DB search
MSNSFEILMNQLGMPAEMRQAPALAQANIERVVVHKISKVWEFHFVFSNILPIEIFLELK
KGLSEEFSKTGNKAVFEIKARSQEFSNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAE
GNQLFIEGSEAIDKEHFKKNHLPNLAKQLEKFGFPTFNCQVEKNDVLTQEQEEAFHAENE
QIVQAANEEALRAMEQLEQMAPPPAEEKPVFDFQAKKAAAKPKLDKAEITPMIEVTTEEN
RLVFEGVVFDVEQKVTRTGRVLINFKMTDYTSSFSMQKWVKNEEEAQKFDLIKKNSWLRV
RGNVEMNNFTRDLTMNVQDLQEVVHYERKDLMPEGERRVEFHAHTNMSTMDALPEVEEIV
ATAAKWGHKAVAITDHGNVQSFPHGYKAAKKAGIQLIYGIEANIVEDRVPIVYNEVEMDL
SEATYVVFDVETTGLSAIYNDLIQVAASKMYKGNVIAEFDEFINPGHPLSAFTTELTGIT
DDHVKNAKPLEQVLQEFQEFCKDTVLVAHNATFDVGFMNANYERHDLPKISQPVIDTLEF
ARNLYPEYKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFIKEVAEKHGVTDLARL
NIDLISPDSYKKARIKHATIYVKNQVGLKNIFKLVSLSNTKYFEGVSRIPRTVLDAHREG
LILGSACSEGEVFDVVVSQGVDAAVEVAKYYDFIEVMPPAIYAPLIAKEQVKDMEELQTI
IKSLIEVGDRLGKPVLATGNVHYIEPEEEIYREIIVRSLGQGAMINRTIGHGEHAQPAPL
PKAHFRTTNEMLDEFAFLGEELARKLVIENTNALAEIFEPVEVVKGDLYTPFIDKAEETV
AELTYKKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVQRSNERGYLVGSR
GSVGSSFVATMIGITEVNPLSPHYVCGQCQYSEFITDGSYGSGFDMPHKDCPNCGHKLSK
NGQDIPFETFLGFDGDKVPDIDLNFSGEDQPSAHLDVRDIFGEEYAFRAGTVGTVAAKTA
YGFVKGYERDYGKFYRDAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPA
DDVTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPNKIPMDDEGVMALF
SGTDVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWLG
NAQDLIKQGIADLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERNGY
IEAMKANKVPEWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRAK
AFDIKTMGAGLEAIKRRMEEISEKRKNNEASNVEIDLYTTLEIVNEMWERGFKFGKLDLY
RSQATEFLIDGDTLIPPFVAMDGLGENVAKQLVRAREEGEFLSKTELRKRGGLSSTLVEK
MDEMGILGNMPEDNQLSLFDELF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagttttgaaattttgatgaatcaattggggatgcctgctgaaatgagacag
gctcctgctttagcacaggccaatattgagcgagttgtggttcataaaattagtaaggta
tgggagtttcatttcgtattttctaatattttaccgattgaaatctttttagaattaaag
aaaggtttgagcgaagaattttctaagacaggcaataaagctgtttttgaaattaaggct
cggtctcaagaattttcaaatcagctcttgcagtcctactatagggaggctttctctgaa
ggtccatgtgctagtcaaggttttaagtccctttatcaaaatttgcaagttcgtgctgag
ggtaatcagctatttattgaaggatctgaagcgattgataaggaacattttaagaagaat
catcttcctaatttagccaaacaacttgaaaagtttggttttccaacttttaactgtcaa
gtcgagaagaatgatgtcctgacccaagagcaggaagaggcctttcatgctgaaaatgag
cagattgttcaagctgccaatgaggaagcgctccgtgctatggaacaactggagcagatg
gcacctcctccagcggaagagaaaccagtctttgattttcaagcgaaaaaagctgcagct
aaacccaagctggataaggcggagattactcctatgatcgaagtgacgacagaggaaaat
cgtctggtatttgaaggggttgtttttgatgtggagcaaaaagtgactagaacaggtcgt
gttttaatcaactttaaaatgacggactatacttcaagtttttctatgcaaaagtgggtt
aaaaacgaggaagaggcccagaagtttgacctcatcaagaagaattcttggctccgagtt
cgagggaatgtggagatgaataacttcacacgcgatttgactatgaacgtacaggatctg
caggaagttgttcactatgagcggaaggatttgatgccagaaggtgagcgtcgggttgag
tttcatgctcatactaacatgtcgactatggatgctttgccagaggtcgaagagattgtt
gcaacagctgctaagtggggacacaaggcggttgctatcacagaccatgggaatgtccag
tcctttccacatggctataaggcggctaagaaagcgggaatccagctgatctatgggata
gaagccaatatcgtggaggaccgtgtccctatcgtctataacgaagtggagatggactta
tcagaagcaacctacgtggtctttgacgtggaaacgacgggactttcagctatctataat
gacttgattcaggttgcggcctctaagatgtacaaggggaatgttattgctgaatttgat
gaatttatcaatcctgggcatcccttgtcagcttttactacagagttaactggaattaca
gatgatcatgtcaaaaatgccaaaccactagaacaagttttgcaagaattccaagaattt
tgcaaggatacggtcctagttgcccacaatgctacctttgacgttggctttatgaatgct
aattatgagcgtcatgatcttccaaagattagtcagccagttattgatacgctggagttt
gctagaaacctctatcctgagtataaacgccatggtttggggcctttgaccaagcgtttt
ggtgtggccttggaacatcaccacatggccaactacgatgcggaagcgactggtcgtctg
cttttcatctttatcaaagaggtagcagaaaaacatggtgtgaccgatttagctagactc
aacattgatctaatcagtccagattcttacaaaaaagctcggatcaagcatgcgaccatc
tatgtcaagaatcaggtaggtctaaaaaatatctttaagctggtttccttgtctaatacc
aagtattttgaaggagtgtcacggattccgagaacggttctagatgcccatcgagagggc
ttgattttaggttcagcctgttcagagggtgaagtttttgacgtggtcgtttctcaaggt
gtggatgcggcggttgaggtggccaagtattatgactttatcgaggtcatgccaccggct
atctatgcgcccttgattgctaaagagcaggtcaaggatatggaggaactccagaccatt
atcaagagtttgatagaggttggagaccgccttggcaagcctgttttggctacgggaaat
gttcactatatcgaaccggaagaagagatttatcgtgaaattatcgtccgtagtttggga
cagggtgcgatgattaaccgaactatcggtcatggtgaacatgcccaaccagcaccactt
ccaaaggctcattttcgaacgactaatgagatgttggatgaatttgcctttttgggagag
gaactggctcgtaaactggttattgaaaacaccaatgccttggcagaaatatttgaaccc
gttgaagtcgttaagggtgacttgtatacgcctttcatcgacaaggctgaagaaacagtt
gctgagttgacctataagaaagcttttgagatttatggaaatccgctgccagatattgtt
gatttgcggattgaaaaagaattaacatccatactggggaatggatttgctgtgatttat
ctggcatcgcagatgctggtgcaacgttctaatgaacggggttatttggttggttctcgt
gggtctgtcggatctagtttcgttgcgaccatgattgggattacggaggtcaatcctctc
tctcctcactatgtctgtggtcagtgtcagtacagtgagtttatcacagatggttcgtac
ggttcaggatttgatatgccccataaggactgtccaaactgtggtcacaaactcagtaaa
aacggacaggatattccgtttgagaccttccttggttttgatggggataaggttcctgat
attgacttgaacttctcgggagaagatcagcctagcgcccacttggatgtgcgtgatatc
tttggtgaagaatatgccttccgtgcgggaacagttggtacggtagctgccaagactgcc
tatggatttgtcaagggttacgagcgagattatggcaagttttatcgtgatgcagaagta
gaacgcctcgctcaaggagcggcgggtgtcaagcggacaacaggccaacacccgggggga
atcgttgttattccgaactacatggatgtctacgattttacgcctgtccagtatccagca
gatgatgtcacggctgaatggcagaccactcactttaacttccacgatatcgatgagaac
gtcctcaaactcgatgtactgggacatgatgatccgaccatgattcgaaaacttcaggat
ttgtctggtattgaccctaataaaattcctatggatgacgaaggcgtgatggcactcttt
tctgggactgatgtgctaggggtaacacctgaacaaattggaacgcctacgggtatgtta
gggattccagagtttggaacaaatttcgtacgtggaatggtagacgaaacccatccgaca
acctttgcggaattgcttcagctgtctggtctgtcccacggtactgacgtttggttgggg
aatgctcaggatctgattaagcaaggaatagcggacctatcgactgttatcggttgtcgg
gacgacatcatggtttacctcatgcatgcgggtctggaacctaagatggcctttaccatt
atggaacgggtacgtaagggtttgtggctaaagatttcagaagaggagagaaatggctat
atcgaagccatgaaggctaataaggtgccagagtggtatatcgaatcctgtgggaaaatt
aagtacatgttccctaaggcccatgcggcagcctacgttatgatggccttgcgtgtagct
tacttcaaggttcaccatcctatttattactactgtgcttacttctccattcgtgctaag
gcttttgatatcaagaccatgggtgcgggcttggaggccatcaagcgcagaatggaagaa
atctctgaaaaacggaagaacaatgaagcctctaatgtggaaatcgatctctatacaact
cttgagattgtcaatgagatgtgggaacgaggtttcaagtttggcaaattagatctctac
cgtagtcaggcgacagagttcctcatcgacggggatacccttatcccaccatttgtagca
atggatggtctgggagagaacgttgccaagcaactggtgcgggcgcgtgaagagggagaa
ttcctctctaaaacagaactacgcaagcgtggtggactctcatcaaccttggttgaaaag
atggatgagatgggtattcttggaaatatgccagaggataaccagttgagtttgtttgat
gagttgttttaa
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integrated database retrieval system
