Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0375
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Entry
SPD_0375 CDS
T00413
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPD_0375 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spd01007
]
SPD_0375 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spd03016
]
SPD_0375 (serS)
Enzymes [BR:
spd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SPD_0375 (serS)
Amino acid related enzymes [BR:
spd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SPD_0375 (serS)
Transfer RNA biogenesis [BR:
spd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPD_0375 (serS)
Prokaryotic type
SPD_0375 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF3450
Dynamitin
CENP-F_leu_zip
Baculo_PEP_C
TMPIT
EzrA
FapA
DUF677
DUF641
TMF_TATA_bd
OVT1
DUF2203
GAS
Motif
Other DBs
NCBI-ProteinID:
ABJ54621
UniProt:
Q04M63
LinkDB
All DBs
Position
complement(379741..381015)
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AA seq
424 aa
AA seq
DB search
MLDIKRIRTDFEAVAEKLATRGVDAAVLNEMKEIDAKRRNILVKVETLKAERNTVSAEIA
QAKRNKENTDDKIAAMQNLSAEVKALDAELAEIDAKLTEFTTTLPNIPADSVPVGADEDD
NVEVRRWGTPREFDFEPKAHWDLGEDLGILDWERGGKVTGARFLFYKGLGARLERAIYNF
MLDEHGKEGYTEVITPYIVNHDSMFGTGQYPKFKEDTFELSDTNFVLIPTAEVPLTNYYR
DEILDGKDLPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYEELEK
MTANAENILQKLNLPYRVVALSTGDMGFSATKTYDLEVWIPAQNNYREISSCSNTEDFQA
RRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEALRPYMGGAE
VIKP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttagatatcaaacgtattcgtacagattttgaagctgtcgcagaaaaattagctaca
cgtggtgtagatgctgctgtcttgaatgaaatgaaagaaatcgatgctaaacgtcgtaac
atcttggtcaaggttgaaactctcaaagcagaacgtaacacagtttctgctgagattgcc
caagctaagcgcaacaaggaaaatacagatgacaagattgctgccatgcaaaatctatct
gctgaggttaaagccttggatgctgaattggcagaaatcgatgctaaattgacagaattt
acaacgactcttccaaatatcccagctgacagcgttcctgttggggctgacgaagacgac
aatgtggaagttcgccgttggggtactccacgcgagtttgacttcgaacctaaagctcac
tgggatctcggtgaagaccttggtatccttgactgggaacgcggtggtaaggtaacaggc
gctcgcttcctcttctataaaggcctcggtgctcgtttggaacgtgctatctacaacttt
atgttggatgaacatggaaaagaaggctatactgaagtcatcacaccttacatagtcaac
catgattctatgtttggtactggtcagtatccaaaatttaaggaagatacttttgaactc
agcgataccaactttgtcttgattccaactgctgaagttcctctgacaaactactaccgt
gatgaaatcttagacggcaaagatcttccaatctacttcactgctatgagtccgtcattc
cgttctgaggctggttctgccggtcgtgatacgcgtggcttgatccgtttgcaccaattc
cacaaggttgaaatggtcaaatttgccaaaccagaagaatcttacgaagaattggaaaaa
atgacagccaacgctgaaaacattcttcaaaaactcaaccttccataccgtgtcgttgct
ctctctactggagatatgggcttctcagctacgaagacttacgacttggaagtgtggatt
ccagcacaaaacaattaccgtgaaatctcaagctgttcaaacacagaagatttccaagcc
cgtcgtgcccaaatccgttaccgtgatgaagcagatggcaaggtgaaactccttcatacc
ttgaacggttctggacttgcagttggacgtacagtggctgcaattcttgaaaattaccaa
aatgaagatggttctgtgaccatcccagaagcacttcgtccatacatgggtggagctgaa
gtcatcaaaccataa
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