Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0532
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Entry
SPD_0532 CDS
T00413
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd03410
Base excision repair
spd03430
Mismatch repair
spd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPD_0532 (recJ)
03430 Mismatch repair
SPD_0532 (recJ)
03440 Homologous recombination
SPD_0532 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_0532 (recJ)
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SPD_0532 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPD_0532 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPD_0532 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
YjeF_N
ThiG
DSPc
Motif
Other DBs
NCBI-ProteinID:
ABJ55439
UniProt:
A0A0H2ZRL7
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All DBs
Position
542832..545054
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AA seq
740 aa
AA seq
DB search
MITPTYEWQFALQVEDADFTKIAKKAGLGPEVARLLFERGIQDQESLKKFLEPSLEDLHD
AYLLHDMDKAVERIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYLPNRF
TDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIALAQSMGVDVIVTDHHSMPETLPD
AYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLTDENR
ILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDL
LTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGVLGIV
AGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAGMTLE
VEQLSDLSQVLEDYVREKGADAGGKNKLNLDEELDLEALSLETVKSFERLAPFGMDNQKP
IFYIKNFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELAVKLS
VNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFPGELPNLAASEAVVVKN
IPEDITQLKTIFQEQHFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDIRYKL
KDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQTVKD
QEMMALGTVQEIYDFLMEKE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgataacacctacttatgaatggcagtttgccctgcaggtagaagatgcggattttaca
aagatagccaagaaggctggactgggtcctgaggtggctcggttattgtttgagagaggg
attcaggaccaagaaagtctgaagaagtttttagaaccttccttggaggacttacatgat
gcttatctgctccatgatatggacaaggcagtggagcggattcgtcaggctattgaagaa
ggggaaaatattctcgtttatggagactatgatgcggatggcatgacttcggcttctatt
gtgaaggaaagtttggaacaacttggtgctgagtgccgagtttacctgccaaatcgtttt
accgatggctatggccctaatgctagtgtttataaatactttatcgagcaagaaggaatt
tccttgattgtgacggtggacaatggggttgctggtcatgaggctattgcattggctcag
tctatgggagtagatgtcattgtgacagaccatcattccatgcctgaaaccctgccagat
gcttatgctattgtccatcctgaacatccagatgcggattatccttttaaatatttggct
ggttgtggagttgctttcaagttggcttgtgccctgttagaagaagtgcaagtggaattg
cttgatttggtcgctattggaactattgcagatatggtgagtctgacggatgaaaatcgt
atcttagttcaatatggtctggaaatgttgggtcatacccagcgcattggtctgcaagaa
atgctggacatggctgggattgctgccaacgaagtaacagaagaaacggttggtttccag
attgctcctcgtttgaatgccttgggtcgcttggatgatcccaatcctgccattgatttg
ttgactggatttgatgatgaggaagcgcatgagattgcccttatgattcaccagaaaaac
gaagagcgcaaggaaatcgttcagtctatctatgaagaagccaagaccatggtggatcct
gagaagaaggttcaggtcttggccaaggaaggctggaatcctggggttctaggaatcgtg
gctggtcgtttattggaagaattgggacagacagtcattgttcttaatatagaagacggt
cgtgccaagggcagtgctcgtagtgtggaagcggtcgatatttttgaagctctggatccc
catcgagacctcttcatcgcctttggaggtcatgcaggtgcagcgggtatgacgctggaa
gttgagcaactctcagatttatctcaggttttggaagattatgttcgtgaaaaaggtgca
gatgctggtggcaagaataagttaaacctagatgaagagttggatttggaggcacttagc
ttggaaacggtcaaaagttttgaacgtttagctccttttggaatggataatcagaaacct
attttttatatcaagaattttcaggtcgaaagtgctcgtactatgggggcaggtaatgcc
catctaaagctgaaaatttccaagggtgaggcgagttttgaagtggtagcctttggtcaa
ggcagatgggcgacagagttttctcaaaccaagaatctagagttagcggttaaattgtct
gtcaaccaatggaatggccaaactgctctccagttgatgatggtggatgcgcgagtggaa
ggtgttcaactttttaacattcgtggaaaaaatgcagtcttgccagaaggtgttccagtc
ttggattttcctggagaactgccaaatcttgcggctagtgaagctgttgtcgtaaaaaac
attccagaggatattactcagctgaagaccatttttcaggaacagcatttctctgctgtc
tatttcaaaaatgatattgacaaggcttattatctgacaggttatgggactagagatcag
tttgccaaattgtacaagactatttaccagttcccagagtttgatattcgctacaagctg
aaagatttggctgcatatcttaatattcaacaaatcttgctggtcaagatgattcaagta
tttgaagaactaggctttgtgacgataaaagatggtgtgatgacagtcaataaagaggcg
ccaaagcgggagataggagaaagtcaaatttaccaaaatctcaaacaaaccgttaaagac
caagaaatgatggcgctgggtacggtgcaagaaatttatgattttttgatggaaaaagag
tag
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