Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0620
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Entry
SPD_0620 CDS
T00413
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPD_0620 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spd01007
]
SPD_0620 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spd03016
]
SPD_0620 (lysS)
Enzymes [BR:
spd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPD_0620 (lysS)
Amino acid related enzymes [BR:
spd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPD_0620 (lysS)
Transfer RNA biogenesis [BR:
spd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPD_0620 (lysS)
Prokaryotic type
Other AARSs
SPD_0620 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ABJ55386
UniProt:
Q04LI2
LinkDB
All DBs
Position
640382..641872
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AA seq
496 aa
AA seq
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MSTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSQELKDKYANLDKEQLHDKN
ETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEG
EVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVT
RSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR
LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVK
GDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLEEAKAIAAEKKVPVEKHYT
EVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNA
FTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLL
TDTTTIRDVLLFPTMK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaacatatggaagaactaaatgaccagcagatcgttcgccgtgaaaaaatg
gctgcgctccgcgaacaaggaatcgatcctttcggaaaacgttttgaacgtactgcaaat
tcacaagaattaaaagataaatatgccaacctcgataaagaacaattacacgataaaaac
gaaacagctactatcgcaggacgcttggtaaccaaacgtggtaaaggaaaagttggtttt
gcccaccttcaagaccgcgaaggccagattcagatctatgttcgtaaggatgctgtcggt
gaagaaaactacgaaatcttcaaaaaagcagaccttggtgacttccttggtgtcgaaggt
gaagtgatgcgtacggatatgggagaactctctatcaaggcaacccacatcacacacttg
tctaaggctcttcgtcctcttcctgagaaattccatggtttgacagacgttgaaacaatt
taccgtaaacgttaccttgacttgatttctaatcgtgaaagctttgaacgctttgtcact
cgttcaaaaatcatctctgaaatccgtcgttaccttgaccaaaaaggattccttgaagtg
gaaacacctgttcttcataatgaagccggtggagctgctgcccgtccatttatcacccac
cacaatgcccaaaacattgacatggtgcttcgtatcgcgactgagcttcacttaaaacgc
cttatcgtgggtggtatggaacgtgtctatgaaattggccgtatcttccgtaacgaagga
atggatgctactcataaccctgagttcacttctatcgaagtttaccaagcctatgcagac
ttccaagatatcatggacttgacggaaggcattatccaacatgctgctaaatcagtcaaa
ggtgatggcccagtcaactaccaaggtactgaaatcaagattaacgaaccatttaagcgt
gttcatatggtggatgctatcagagaaattactggtgtcgatttctggcaagacatgact
ttggaagaagctaaagctatcgctgctgagaagaaagttccagttgagaaacactacact
gaggttggtcacatcatcaatgccttctttgaagagtttgttgaagaaactttaatccaa
ccaacctttgtctatggacatccagtagctgtatctccactcgctaagaaaaatcctgaa
gaccaacgctttactgaccgtttcgagctctttatcatgactaaggagtacggtaatgcc
tttactgagctcaacgacccaatcgaccaacttagccgttttgaagcccaagctaaagcc
aaagaacttggtgatgatgaagcgacaggaatcgactatgactacattgaagcccttgaa
tacggtatgccaccaacaggtggtttgggaatcggtatcgaccgtctctgcatgctcctc
actgatacaacaactatccgtgatgtattgctcttcccaacaatgaaataa
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