Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0910
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Entry
SPD_0910 CDS
T00413
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd00260
Glycine, serine and threonine metabolism
spd00460
Cyanoamino acid metabolism
spd00630
Glyoxylate and dicarboxylate metabolism
spd00670
One carbon pool by folate
spd00680
Methane metabolism
spd01100
Metabolic pathways
spd01110
Biosynthesis of secondary metabolites
spd01120
Microbial metabolism in diverse environments
spd01200
Carbon metabolism
spd01230
Biosynthesis of amino acids
spd01240
Biosynthesis of cofactors
spd04981
Folate transport and metabolism
Module
spd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPD_0910 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SPD_0910 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPD_0910 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPD_0910 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPD_0910 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPD_0910 (glyA)
Enzymes [BR:
spd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPD_0910 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABJ55301
UniProt:
Q04KR0
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All DBs
Position
920817..922073
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AA seq
418 aa
AA seq
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MIFDKDDFKAYDADLWNAIAKEEERQQNNIELIASENVVSKAVMAAQGSILTNKYAEGYP
GRRYYGGTDVVDVVETLAIERAKEIFGAKFANVQPHSGSQANCAAYMSLIEPGDTVMGMD
LAAGGHLTHGAPVSFSGQTYNFLSYSVDPETELLDFDAILKQAQEVKPKLIVAGASAYSQ
IIDFSKFREIADAVGAKLMVDMAHIAGLVAAGLHPSPVPYAHITTTTTHKTLRGPRGGLI
LTNDEELAKKINSAIFPGIQGGPLEHVVAAKAVSFKEVLDPAFKEYAANVIKNSKAMADV
FLQDPDFRIISGGTENHLFLVDVTKVVENGKVAQNLLDEVNITLNKNSIPYETLSPFKTS
GIRIGAAAITARGFGEEESRKVAELIIKTLKNSENEAVLEEVRSAVKELTDAFPLYED
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgacaaagatgattttaaagcatatgatgctgatctctggaatgctattgcc
aaagaagaagaacgccaacaaaataatatcgagttaattgcttcggaaaacgtagtttcc
aaggctgttatggcagctcaagggtctatcttgacaaataaatatgccgagggttaccca
ggacgccgttattatggtggaactgatgtagtagacgttgtagagactcttgctattgaa
cgcgcaaaagaaattttcggtgctaaatttgctaatgtccaaccacattcaggaagccaa
gctaactgtgcggcttacatgtccttgattgagccaggtgatacggttatgggaatggat
ttggcagcaggtggacacttgacccacggagctccagttagcttctctggtcaaacctac
aactttctttcctatagtgtggatcctgaaacggaacttttggactttgatgctatcttg
aaacaagcccaagaagtaaaaccaaaactgattgtagctggtgcttcagcatattctcaa
attatcgatttttcaaaattccgtgaaatcgcagatgctgtcggtgcgaagctcatggtg
gacatggcccatatcgctggtttggttgcggctggccttcatccaagcccagttccatac
gctcatatcacaacaacaacgacccacaaaacccttcgtggacctcgtggtggtttgatt
ttgaccaatgacgaagaacttgctaaaaaaatcaattcagctattttcccaggtattcag
ggcggtcctttagagcatgttgtggcggctaaggcagtttccttcaaagaagttttggat
ccagccttcaaggaatatgctgccaatgtaattaagaacagcaaggctatggcagatgtc
ttcttgcaagaccctgatttccgtattatttcaggtggaactgaaaaccatctcttcctt
gttgatgtgactaaggttgtagaaaacggaaaagttgctcaaaacttgctggatgaagtc
aatattaccctaaataaaaattcaatcccttacgaaaccttgtcgccattcaagacaagt
gggattcgtatcggagcagcagctattactgcacgtggatttggtgaagaagaaagtcgc
aaagtggctgaactcatcattaaaacccttaagaattcagaaaatgaggctgtattagaa
gaagtgagaagtgcagtcaaagaattgacagatgccttcccattatacgaggactaa
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