Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0939
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Entry
SPD_0939 CDS
T00413
Name
(GenBank) transcriptional activator, Rgg/GadR/MutR family protein
KO
K20374
HTH-type transcriptional regulator, SHP3-responsive repressor
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPD_0939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spd03000
]
SPD_0939
Transcription factors [BR:
spd03000
]
Prokaryotic type
Helix-turn-helix
Other families
SPD_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
HTH_19
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ABJ54684
UniProt:
A0A0H2ZNB8
LinkDB
All DBs
Position
complement(948319..949173)
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AA seq
284 aa
AA seq
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MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
EFLILHDEDYTKTESFANLVQYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILH
TMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNYIYS
SLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaacttggtgtcacacttagaaaaattcgtaagggcaaacaaattagtcta
tgttctgtagctgatgagcatctttcaaaatcgcaaatctctcgttttgaacgtggggaa
tcagaaatatcttgtattcgactgatcaatattttagacaaattacacattacgttagat
gagtttcttattttacacgatgaagactataccaaaactgagtcttttgctaacttagta
cagtatatccgtaaacaatattcatcacaaagtatcaataatatagcatgtctactttct
gatacttctgattacactctaaattcttttgagaaaacaatggtaaaatctattttacac
acaatggattcgaacatcattccatcagatgaagagcttcttcatctgacagactatctt
ttcaaaattgaaaaatggggctattatgaaatcattttattaggtaactgtgtacgcaca
attaactacaactcctacttcttattaactaaagagatgttaaataactatatttactca
tctctgaataaaactaataagcagattgtctctcagcttgctattaattgcttcattcta
agcattgataaggaagaattttctaattgctcctatttaattagtaagataaagacattg
ttggataatgaactaaacttttatgaacaaacagtttttctctatgcaactggttacttt
gaatttaaacgttgccaatcaaccagtggaattgaaaaaatgaaacaagccatacaagtc
ttcgatattttaggagaaaataagttaaaattacactatactgaccattttaataaacca
gtaaacaaaaaataa
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