Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0958
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Entry
SPD_0958 CDS
T00413
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPD_0958 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spd03021
]
SPD_0958 (rpoD)
Transcription machinery [BR:
spd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPD_0958 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
ABJ54934
UniProt:
A0A0H2ZQA1
LinkDB
All DBs
Position
972813..973922
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AA seq
369 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGI
SITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
ALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
DEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacaaaaagaagtaacaacatttgacgtacaggtagcagaatttatccgt
aatcataagcaaaaagggacagcaacagatgatgaaatcaatgcaagtctggttattcct
tttaccttggacgctgatgggattgaagatctcttgcaacggattcaggatgcagggatt
tctatcacagataacgaaggaaatccaagtgcgcgtgttcttagcaatgaagaagaacca
gaactcagcgatgaggacttgattgggtcaacttctgctaaggtcaatgaccctgtccgt
atgtacttgaaagaaataggggtcgttcctctcttgaccaatgaagaggagaaagagttg
gcactggctgttgaagctggtgatatcgaagccaaacaacgtcttgcggaagccaatctt
cgtttggttgtttccattgccaaacgctatgtcggtcgtggtatgcagttccttgacttg
attcaagaaggaaatatgggcttgatgaaggcggttgacaagtttgactattctaaaggg
ttcaagttttcaacttatgcaacttggtggattcgtcaggctatcactcgtgctattgcg
gaccaagctcgtaccatccgtatcccagttcacatggttgaaactatcaataaattggtt
cgtgaacagcggaatctccttcaagaattggggcaagatccgacaccagaacagattgct
gaacgaatggatatgacacctgataaggttcgtgaaatcttgaagattgcccaagaacca
gtatctcttgaaactcctatcggtgaagaggacgatagccaccttggagactttatcgaa
gatgaagtgattgaaaatccagtggattatacgactcgtatcgtcttgcgtgagcaattg
gatgaaatcttagatactcttacagaccgtgaagaaaatgttctgcgtctacgttttgga
ctagatgatggaaaaatgcgcacacttgaagatgtggggaaagtctttaacgtaactcgt
gagcgtatccgtcagattgaagcaaaggctttgagaaaactacgccaaccaagtcgtagc
aaaccgcttcgtgattttattgaagactaa
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integrated database retrieval system
