Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1015
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Entry
SPD_1015 CDS
T00413
Symbol
rexB
Name
(GenBank) ATP-dependent exonuclease RexB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_1015 (rexB)
Enzymes [BR:
spd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPD_1015 (rexB)
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPD_1015 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Arg_decarb_HB
Med15_fungi
Motif
Other DBs
NCBI-ProteinID:
ABJ55254
UniProt:
Q04KF9
LinkDB
All DBs
Position
1028990..1032289
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AA seq
1099 aa
AA seq
DB search
MKNSNEAEMKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYLSQ
QASFSITVTRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDP
QLIQQLIELYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQESQLSHL
IEAIENDKVSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFS
EGNLYQASVKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKD
RENLQIWSCLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQ
IPFYLGRSEAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYI
RYLGINGLPAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAEKLLQKWSVF
LKEGAVTKQLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSG
MSLSQYRTIPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNL
NQATEEGVQLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIH
FGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKL
DQQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQ
EELRLHPDARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQ
FTKEVLLDVARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRL
KANGAIGVVDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQS
LMAVKSLAGAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLY
KKAAEKILAGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRL
VGEKLKQAWLEKIREELNR
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattccaacgaggctgagatgaaattactttatactgatattcggacttctttg
acagaaattctaacaagagaggcagaagagctagttgcagctggcaagcgggtcttctac
attgcccccaactctctttcttttgaaaaggaacgcgccgtgctggaatacttgtcccag
caggcttctttttcgattaccgtcacgcgctttgctcaaatggctcgctatctggtcttg
aatgatttaccagctaaaactactcttgatgatatcggtcttgggttggccttttacaaa
tgccttgccgaactcgatcccaaggacttgcgtgtttatggcgctattaagcaggatcct
caattgatccagcagttaattgagctttaccatgagatgaccaaatctcagatgagtttt
ttggacttggagaatttaacagatgaggataagagggcggatttactcttgatttttgag
aaagtaacagcctatcttaatcaaggtcagttagcccaggaaagtcagttgtcccatttg
attgaggctattgagaatgacaaggtaagtagtgattttaatcaaatcgccttggtcatt
gacggctttactcgtttttctgctgaggaagagcgggttgtggacttacttcacggcaaa
ggtgttgagattgttatcggggcttatgctagtaagaaagcctataccagtccttttagc
gagggcaatctctaccaagccagcgtaaaatttctccatcatctggcttctaaataccaa
acgcctgctcaggactgttctcaaactcatgagaagatggatagttttgacaaggcctct
cgtttgttggagtcttcttatgacttttcagaactcgctttggatgtcgatgagaaagac
cgtgaaaatttacaaatctggtcttgtttgacgcaaaaggaggagttggagctagtagcc
cgtagtattcgtcagaaattacatgagaactcagacctgagctacaagcattttcgtatt
ctcttgggggatgtagcttcttaccagttatctctcaaaaccatttttgaccagtatcag
attcctttttatcttggtagaagcgaagccatggctcatcatcccttgactcagtttgtc
gagtctattttagctttaaaacgttaccgttttcgtcaggaggatttgattaatcttctt
agaactgatttgtatactgacctcagtcagtctgatattgatgcttttgagcaatatatc
cgctatcttggtatcaatggcttgccagcctttcagcaaaccttcaccaaatcccaccat
ggaaaatttaatcttgagcgtttgaatgtcctccgcctgagaattttagcacctcttgaa
accctctttgccagccgaaaacaaaaggctgaaaaactcctacaaaaatggagtgtcttt
ctaaaagaaggagctgtgaccaagcagttacaagatttgacaaccactttggaagctgta
gaacaggaaagacaagccgaagtttggaaggctttctgccatgttttagaacaatttgcg
actgtttttgctggttcacaggttagtctggaagacttcctagccttgctccattctgga
atgagtttgtcccaataccgtaccattccagcaacagtggacactgttctggtgcagagt
tacgatttgattgcaccattgactgctgactttgtctatgctattggactaactcaggac
aatttaccaaaaatttctcaaaacaccagtcttctgacagatgaagaaaggcaaaaccta
aaccaagcgaccgaagaaggcgttcaattactgattgccagcagtgaaaatctcaagaaa
aatcgctacactatgctttccttggtcaattctgctcgtaagcagttgttcttgtcggct
ccaagcctttttaacgaaagtgaaagtaaggaatctgcctatcttcaagagttgatccat
tttggatttaggcggagagagaagaggatgaatcacaaaggactgtctaaggaggatatg
gggtcctatcacagtcttttgtctagtctggttgcctatcaccagcagggtgagatgagc
gatactgagcaagatttgacttttgtcaaggttctgtcgcgtgtcataggtaaaaaacta
gatcagcaaggtctggaaaatccagctatcccaaccagtccaagcagcaagaccttagcc
aaggacaccttgcaagctctctatcctgccaaacaggagttttacctgtctacgtcgggt
ttgacagagttttatcgcaatgaatacagttatttcctacgctacgttttaggcttgcag
gaggaattacgtttgcatcctgatgcccgtagtcacgggaatttcttgcatcgtatcttt
gaacgcgccttacagttgcctaatgaagattcctttgaccaacgtctagaacaagctatt
caagaaaccagtcaagaacgcgaatttgaagctatttatcaagaaagtttggaagcccag
tttaccaaggaagttttgcttgatgttgcacggacaactggacatattctccgacacaat
ccagccatcgaaaccatcaaagaagaagcaaattttggtggaaaagaccaagcctttatt
caattagacaatggacgcagtgtctttgtacgaggcaaggtggaccggattgaccgtttg
aaagctaatggagcgataggagtagtagactacaaatccagtctgactcagttccagttt
cctcatttctttaatgggctcaattctcagttaccaacctatcttgctgccctaaaaaga
gaaggggagcagaactttttcggcgccatgtacttggaaatggctgaacctgtccaatct
ctgatggcggtaaaaagtctggcaggagcagtggtagaagccagcaaatctatgaaatac
caagggctcttcttggaaaaagaaagcagttatttaggcgaattttataacaaaaacaag
gctaatcaactgacagatgaggaatttcagctcctactggactacaatgcctatctttac
aagaaagctgctgagaagattttagcaggccggttcgccatcaatccttatactgaaaat
ggcagaagcattgccccatacgtccagcaacatcaggctattacaggctttgaagccaat
taccatctgggccaagcccgtttcctagaaaagttggacctagctgatggcaagcgtctg
gtcggagaaaaactcaagcaagcttggcttgaaaaaataagagaggagttgaatcgatga
DBGET
integrated database retrieval system
