Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1016
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Entry
SPD_1016 CDS
T00413
Symbol
rexA
Name
(GenBank) exonuclease RexA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_1016 (rexA)
Enzymes [BR:
spd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPD_1016 (rexA)
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPD_1016 (rexA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
AAA_30
AAA_7
AAA_22
KdpD
ResIII
AAA_16
PIF1
Motif
Other DBs
NCBI-ProteinID:
ABJ53740
UniProt:
Q04KF8
LinkDB
All DBs
Position
1032286..1035936
Genome browser
AA seq
1216 aa
AA seq
DB search
MKLIPFLSEEEIQKLQEAEANSSKEQKKTAEQIEAIYTSAQNILVSASAGSGKTFVMAER
ILDQLARGVEISQLFISTFTVKAATELKERLEKKISKKIQETDDVDLKQHLGRQLADLPN
AAIGTMDSFTQKFLGKHGYLLDIAPNFRILQNQSEQLILENEVFHEVFEAHYQGKQKETF
SHLLKNFAGRGKDERGLRQQVYKIYDFLQSTSNPQKWLSESFLKGFEKADFTSEKEKLTE
QIKQALWDLESFFRYHLDNDAKEFAKAAYLENVQLILDEIGSLNQESDSQAYQAVLARVV
AISKEKNGRALTNASRKADLKPLADAYNEERKTQFAKLGQLSDQIAILDYQERYHGDTWK
LAKTFQSFMSDFVEAYRQRKRQENAFEFADISHYTIEILENFPQVRESYQERFHEVMVDE
YQDTNHIQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNEKFQRYAQNPQEGRLII
LKENFRSSSEVLSATNDVFERLMDQEVGEINYDNKHQLVFANTKLTPNPDNKAAFLLYDK
DDTGEEEESQTETKLTGEMRLVIKEILKLHQEKGVAFKEIALLTSSRSRNDQILLALSEY
GIPVKTDGEQNNYLQSLEVQVMLDTLRVIHNPLQDYALVALMKSPMFGFDEDELARLSLQ
KAEDKVHENLYEKLVNAQKMASSQKGLIHTALAEKLKQFMDILASWRLYAKTHSLYDLIW
KIYNDRFYYDYVGALPNGPARQANLYALALRADQFEKSNFKGLSRFIRMIDQVLEAQHDL
ASVAVAPPKDAVELMTIHKSKGLEFPYVFILNMDQDFNKQDSMSEVILSRQNGLGVKYIA
KMETGAVEDHYPKTIKLSIPSLTYRQNEEELQLASYSEQMRLLYVAMTRAEKKLYLVGKG
SREKLESKEYPAAKNGKLNSNTRLQARNFQDWLWAISKVFTKDKLNFSYRFIGEDQLTRE
AIGELETKSPLQDSSQADNRQSDTIKEALEMLKEVEVYNTLHRAAIELPSVQTPSQIKKF
YEPVMDMEGVEIAGQGQSVGKKISFDLPDFSTKEKVTGAEIGSATHELMQRIDLSQQLTL
ASLTETLKQVQTSQAVRDKINLDKILAFFDTVLGQEILANTDHLYREQPFSMLKRDQKSQ
EDFVVRGILDGYLLYENKIVLFDYKTDRYDEPSQLVDRYRGQLALYEEALSRAYSIENIE
KYLILLGKDEVQVVKV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttattccctttttaagtgaggaggagattcaaaaactgcaagaagcagaagca
aattcgagcaaggaacagaagaaaactgccgagcaaatcgaagctatctacacttctgcc
cagaatatcctggtctcagcatcggctggttctggaaagacctttgtcatggcagagcgc
attctggaccaattggcgcgtggtgtcgaaatttctcaactctttatctcaacctttacc
gtcaaggctgcaactgaacttaaagaacgtttagagaaaaaaatcagcaagaaaatccaa
gaaacagatgatgtcgacctcaaacaacacttgggtcgccagttggcagacctacccaac
gctgccattggaaccatggattctttcacacaaaaattccttggcaaacatggttatctg
cttgatattgcacctaatttccgtattttacaaaaccaaagcgagcaacttattctcgaa
aacgaagtctttcatgaggtctttgaagcgcattaccaaggtaaacagaaagagaccttt
agtcatttgctgaaaaactttgctgggcgtggcaaggacgaacggggtctgcgccagcag
gtctataaaatctatgacttcctccaatccaccagtaatcctcaaaagtggctgagtgaa
tctttcctcaaaggatttgagaaagctgattttaccagtgaaaaagaaaaactgaccgag
caaatcaaacaagccctttgggatttggaaagctttttccgttaccatctggataacgat
gccaaggagtttgcaaaggctgcctatttagaaaatgttcagttaattctggatgaaatt
ggctccctaaatcaggagtccgatagtcaggcttatcaggcagtgcttgcgcgtgttgtc
gccatctctaaggagaaaaacggtcgagctctgactaatgccagccgtaaggctgatttg
aagcccctggctgatgcctacaacgaagagagaaagacccagtttgctaaactaggacaa
ttatcagaccagatagcgattctcgactatcaagaacgttatcatggagacacttggaaa
ctagctaaaaccttccaatctttcatgagcgattttgtagaggcttatcgtcagagaaaa
cgacaggaaaatgcctttgaattcgctgatatcagccattacaccattgagattttagag
aatttcccacaagttcgtgagtcttatcaggagcgcttccatgaagtcatggtcgatgag
tatcaggataccaaccatattcaagaacggatgctggaattgttgtctaatggccacaat
cgctttatggtgggagatatcaagcaatccatctatcgtttccgtcaggcagacccgcag
attttcaatgagaaattccaacgctatgcgcaaaatccccaagaaggcaggctcattatc
ctcaaggaaaatttccgtagtagttcagaagtgctgtcagcaaccaatgatgtctttgaa
cgtctcatggaccaagaggtcggcgaaatcaactatgataacaagcaccagcttgttttt
gccaataccaaactgactcccaatccagacaacaaggcagcatttctcctctacgacaag
gacgatacaggtgaggaagaagagagtcaaacagaaacgaaactaacaggcgaaatgcgc
ttagttatcaaggagattctgaaacttcatcaagaaaaaggtgttgcctttaaggaaatt
gcccttctgacctccagccgcagtcgtaatgaccagattctcctcgccctgtctgagtac
ggaattcctgtcaaaactgacggagagcaaaacaattatctccaatccctagaagtgcaa
gtcatgctagacactcttcgtgtcattcacaatcccctgcaagactacgccttggttgcc
cttatgaagtctccaatgtttggttttgatgaggatgagctagcacgtttgtcccttcag
aaagcagaggataaagtccacgaaaatctctatgagaaactggtcaatgcacaaaaaatg
gcaagtagtcaaaaaggcttgattcacacagctctagctgaaaaactaaagcaattcatg
gatatcctagcttcttggcgcttgtatgccaaaacccactctctctatgacttgatttgg
aagatttacaacgaccgtttttattatgactatgttggggctttgccgaatggtcctgct
aggcaggccaatctctatgccctagcactgcgtgctgatcaatttgaaaagagcaatttc
aaaggtttgtcgcgttttattcgtatgattgaccaagtcttagaagcccagcacgatttg
gcaagcgtggccgtcgcaccgccaaaagatgcagtagagctcatgaccatccacaagagt
aaagggctggagtttccttacgtctttatcctcaatatggatcaagatttcaacaagcaa
gactctatgtcagaagtcattctcagtcgtcagaatggtcttggtgtcaaatatattgcc
aagatggagacaggggcagtagaagaccactatcctaaaaccatcaaactctccattcct
agtctgacctataggcagaacgaagaggaattacagctagcaagctattctgagcagatg
cgtttgctgtatgttgctatgacgcgggctgagaaaaagctctatcttgtcggcaagggt
tctcgtgaaaagctggaatccaaggaatacccagcagccaaaaatgggaaactaaatagc
aatactagactgcaagcacggaatttccaagattggctttgggctatcagtaaagtgttt
actaaggacaagctcaactttagttatcgttttattggcgaagatcagttgaccagagaa
gctatcggagagttggaaaccaagagtcctctccaagatagctcccaagcagacaatcgt
cagtcagataccatcaaagaagctctggaaatgctgaaggaggtggaagtttataatact
cttcaccgcgcagctattgaacttcctagtgttcaaaccccaagtcaaatcaagaaattc
tacgaaccagttatggatatggaaggtgtcgagattgctggtcaaggtcagtcagtaggc
aagaaaatcagcttcgatttgccagatttttcaaccaaagaaaaggtaactggagctgag
attggtagtgctactcacgaactcatgcagagaattgacctcagccagcaactaaccctt
gctagcctaacagaaacactcaaacaagttcaaactagccaagctgtcagagacaagatc
aatcttgataaaattcttgctttctttgacacagtactcggtcaggaaattcttgctaat
accgaccatctttatcgcgagcaacctttctccatgctcaaacgagaccaaaagagtcag
gaagactttgttgtccgtggtatccttgatggctatctgctttacgaaaacaaaattgtt
ctgttcgactacaagacagaccgctatgatgaaccaagtcaactcgtagaccgctatcgt
ggtcagttagctctatacgaagaggctttatcacgagcctattcgattgaaaatattgaa
aaatacttgattttactcggtaaagacgaggttcaagttgtaaaagtataa
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