Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1066
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Entry
SPD_1066 CDS
T00413
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Pathway
spd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPD_1066 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spd03400
]
SPD_1066 (xseB)
Enzymes [BR:
spd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SPD_1066 (xseB)
DNA repair and recombination proteins [BR:
spd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SPD_1066 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Trimer_CC
Nup49_C
W2
DUF6687
KxDL
PqqF-like_C_4
Motif
Other DBs
NCBI-ProteinID:
ABJ54820
UniProt:
Q04KB1
LinkDB
All DBs
Position
complement(1091311..1091523)
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AA seq
70 aa
AA seq
DB search
MSKQKKFEENLAELETIVQSLENGEIALEDAITAFQKGMVLSKELQATLDKAEKTLVKVM
QEDGTESDFE
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaaagaaatttgaggaaaatctagcagaactggaaaccattgtccaaagt
ttggaaaatggtgaaattgctctggaagatgcgattactgcctttcaaaagggcatggtc
ttgtcaaaagagctccaagctacgctggacaaggctgaaaagaccttggtcaaggtcatg
caagaagacggaacagaaagtgattttgaatga
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