Streptococcus pneumoniae D39 (virulent serotype 2): SPD_1070
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Entry
SPD_1070 CDS
T00413
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spd
Streptococcus pneumoniae D39 (virulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spd03016
]
SPD_1070 (truB)
Enzymes [BR:
spd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPD_1070 (truB)
Transfer RNA biogenesis [BR:
spd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPD_1070 (truB)
Prokaryotic type
SPD_1070 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ABJ54024
UniProt:
Q04KA7
LinkDB
All DBs
Position
complement(1094258..1095136)
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AA seq
292 aa
AA seq
DB search
MNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQ
DEGKIYEGEIILGYSTTTEDASGEVVAETPVLSSLDEKLVDEAIASLTGPITQIPPMYSA
VKVNGRKLYEYARAGQEVERPERQVIIYQFERTSPISYDGQLARFTFRVKCSKGTYIRTL
SVDLGEKLGYAAHMSHLTRTSAAGLQLEDALALEEIAEKVEAGQLDFLHPLEIGTGDLVK
VFLTPEEATEVRFGRFIELDQTDKELAAFEDDKLLAILEKRGNLYKPRKVFS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcaacttaaaaaaagaagcaggaatgacctcgcatgatgcggttttt
aaactgcgtaagattttgggaaccaagaaaattggtcatggtgggaccttggatccggat
gtggtgggtgttttgccgattgcggttggcaaggcgacacgcatggtcgagtttatgcag
gacgagggtaagatctatgagggggaaatcattctgggctattccacgacgactgaggat
gctagtggggaagtggtcgcagaaacccctgttttgtcttcattggatgaaaagcttgtt
gatgaagcgattgctagcttgactgggcctattactcagattccccctatgtattcggca
gttaaggttaatggtcgcaagctctatgagtatgcgcgtgctggtcaggaagtggagcgt
ccagaacgtcaggtgatcatttatcaatttgagcgaacaagtccgatttcttatgatggc
caacttgcccgattcacttttcgtgtaaaatgcagtaaagggacttacatccgtactttg
tcagttgatttgggtgaaaagcttggttatgcggctcatatgtcccatttgactcgtact
agtgctgctggcttacaattagaagacgctcttgccttggaggaaattgctgaaaaagta
gaggctgggcaattagattttctccatcctttagagattgggacaggtgaccttgtcaaa
gttttcctaactccagaagaggctacagaagttcgatttggtcgttttattgagctagac
caaacggacaaagaactggctgcctttgaagatgataaattgttagccattctagaaaaa
cggggcaatctctataagccaaggaaggtttttagctag
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