Sphingobacterium sp. DR205: G6053_00435
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Entry
G6053_00435 CDS
T06466
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
spdr
Sphingobacterium sp. DR205
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarboxypepD_reg
CarbopepD_reg_2
STN
SpaA
Big_1
DUF6795
CooC_C
sCache_2
DUF1416
Motif
Other DBs
NCBI-ProteinID:
QIH31466
UniProt:
A0A6G7BNN9
LinkDB
All DBs
Position
86139..89642
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AA seq
1167 aa
AA seq
DB search
MKLIMVIMIAFLVQVKANVLAQRISLSEKNTSLQKVIDNIHKQSGYDFLVLDYKLVSRAT
PVTIQINSGSLKEVLDRILLPRGLDYILEDKSIVIKGKVNESQVANSIMKAYDEVLQQTV
RGRVVNENGEPLAGATIYVLDSGEKRTSKQTSSDINGLFEIKGIQNGDLLEISYLGFKLQ
KITSKTEIGTIVLYPISTKVDEVQVVNTGFYSIPKERVTGSFTVIDNKLLNRSVGGNILQ
RLDGVTSGVQFVTPNGTKASDIRVRGLATIQSDASPLIVVDNFPYDGDISSINPNDIDNI
TILKDGAAASIWGARAGNGVIVITTKKGQYGQKGQLSINSNVTIGQKPDLMYSRNRLPSE
TVMAIEKEKYEKGGYYLENAQQTAFPAYVEMLIARDKGTLSPEEFARQEAILKNTEVRQG
AMKYLYQPAVYQQYALNARGGGESFTYYASGGYDKSRSSEVGAFNDRINLNLQNTFRPFP
HLELSTALWYSRQANQNNQITLDDLRGNATNIGLSPYTRLFDENGNPASVIKEYRQPYVE
QAGANGLLDWQYRPLEERGLMDRLGNSDELRANLGLRYDFLRHFNINATYQYIRGSSSST
AEYDKDSYYARNIVNRFTQADGTRIIPYGGVFRELPSTFSRSHSARAQLDYSQKFSDEHE
ITTLAGAEIREMIQLTDPGYTLYNYDPDLMIGDNNYNYTENYKIRPSGRSRLLAPPSAKQ
QLTDRYLSYFGNASYTYKTRYILSGSLRWDGSNLFGVKTNQKGTPLWSMGASWELTKESW
FKLPVMDYLRLRGTYGIAGNVNKNVSSLPTIEHAATNENTGLPQAIVRSIGNPSLRWEQV
KTFNMGLDIRLLDNRISVSADYYVKNANDLIGASVLPPSSGIYPESFAESSNLVNYANLK
TKGMDLQLSSRNIRGAFNWNSTLLFNIVHNEVTRYSANNNIGLYNYLLPPSFPVVGKSKD
ILYALPKYSLDPEDGTVLMFIDGQRTRNGVDYYNSLSPEDLIGTGVTVPTTYGSLRNEIR
WKNLSLSFLISWKMGHVFRRSTTVPNGEYRLQYHMDYLKRWQNPGDERWTDIPATSPNPS
DNMYSMFEQYENFVTSGNHLRLQDLSFSYDLPVSMLPKSVFKNIQFYAYARNLGIMWKAN
HYGIDPDYPNADYVVPKSFAFGLRLDF
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatcatggtcatcatgatagcctttctggtacaggtaaaagcaaatgtcctg
gcccagcggataagtctcagcgagaaaaatacttcgttgcaaaaggtcattgacaatatc
cataaacagtcaggttatgattttctggtgttggattataaattagtaagccgtgctact
cctgtaacgatacaaataaacagcggaagtctaaaggaagtgttggacaggattctcctt
cccagaggattggattatatattagaagacaagtcaattgttatcaagggaaaggtcaac
gagtcacaggtggccaattctatcatgaaagcttatgacgaagttctacaacaaacagtc
cggggacgtgttgtaaatgagaacggtgaaccacttgctggagcgacgatttatgttctg
gatagcggagaaaaaagaacttcaaaacaaacaagtagtgatataaatggtctttttgaa
ataaagggaatacaaaatggtgatcttttagaaatttcctatttgggttttaagttgcag
aaaatcactagcaaaacagaaataggaactattgtattatatcccatctctacaaaagtt
gacgaagtacaggtcgtcaataccgggttctacagtattccaaaggaaagagtcaccgga
tcatttacggttatagacaacaaactgctgaaccgctcagtgggtggcaacatcctccag
cgactcgacggtgtcacctccggagttcagtttgtcacaccaaatggtaccaaagcatcc
gacatccgggtaagaggactggcgactatacagtccgatgcgagcccgctcattgttgtc
gacaactttccctatgatggtgatatcagctctataaatccgaatgatattgataacatc
acgatcctgaaagacggtgccgcagcatctatatggggagcacgtgcgggaaatggtgtg
atcgtgatcacaacaaaaaaaggacaatatggacagaaagggcagctttccatcaatagc
aatgtaactattggccaaaaacccgacctgatgtacagccggaaccgtctaccctctgag
actgtcatggcgatcgaaaaagagaaatacgaaaaaggagggtattatctggaaaatgca
cagcagactgcttttccagcgtatgtggaaatgctgatcgcgcgggataagggaacactc
agccccgaagaatttgcccggcaggaagccattttaaaaaatacggaagttcgccaggga
gcgatgaaatatctctaccagcccgccgtataccagcagtatgcgcttaatgcacgtgga
ggaggcgaaagttttacctattatgcgtcaggcggatatgacaaaagccgctccagcgaa
gtcggagccttcaatgaccgaataaatctcaatctacaaaataccttcaggccatttccc
catctggaactgtccacagcactttggtacagcagacaggcgaatcagaacaatcagatc
acattggacgatctcaggggtaatgccaccaatatcggtctctcaccctacacccgctta
tttgatgaaaacggaaatcctgcatctgtcataaaagagtacagacagccttatgtggag
caggcaggggctaacggcttacttgactggcaatatcgcccactggaagaacggggtctt
atggacaggctgggaaacagtgacgagctcagggcaaaccttggcctgaggtacgatttt
ctccggcattttaacatcaacgctacctatcaatatatccggggcagctcatccagcacg
gccgagtatgataaagacagctattacgcgcgcaatatcgtcaaccgcttcacacaggcc
gacggcacacggattattccctatggcggagtattccgcgagctgccgtccactttttcg
cgaagccattctgcacgcgcacagctggactactcacagaaatttagcgacgaacatgag
ataaccacactggcaggtgctgagatcagggaaatgatacagcttacagacccgggctat
acactctataattatgatcccgatttgatgatcggggacaacaattacaactataccgaa
aattataagatacggcccagcggcaggtcaagactccttgcccctccttctgcaaaacag
cagcttacagaccgttacctgtcctattttggaaatgcaagctatacctataaaaccaga
tatattctgtccggttcactccgatgggatgggtcaaacctgttcggagtgaaaaccaac
cagaaaggaacaccattatggtctatgggagcaagctgggagcttaccaaagaatcctgg
ttcaaattgcctgtcatggattatctacgcctaaggggaacttatgggatcgcaggaaat
gtaaacaaaaatgtaagttcccttccaactatcgaacatgctgcgaccaatgaaaacacc
ggccttccacaggcaattgtgcgaagtatcggaaatccatccctgcgctgggaacaggta
aaaacatttaatatggggctcgatatccgattgctcgataatcgcatttcggtaagcgcc
gattattacgtaaaaaatgcaaacgacctgatcggagccagcgtactaccacccagtagc
ggaatttatccggaaagctttgctgaaagctcgaatcttgtcaactatgcgaacctgaaa
acaaaaggaatggacttacagctcagcagccgaaatatccgtggggcttttaactggaac
agtacacttcttttcaacatcgtccataatgaagtcacccgatattcagcaaataataat
atcggattatacaattatctgcttccaccttcttttcccgtagtgggtaaaagcaaagat
attttatatgctttacctaaatattcgctcgatcctgaagatgggacggtactcatgttt
atagatggacaacgtaccagaaacggagtggattattataacagtctttcgcctgaagac
ctcatcggcacaggggtcactgttccgaccacttatggttccttacggaatgagatccga
tggaagaacttgagtctgtctttccttatttcatggaaaatgggccatgtattcaggcgt
tcgacaactgttcccaacggagaatataggctgcagtatcatatggattatctaaaacgg
tggcaaaacccgggggacgaacgctggacagacataccggcaacatcgcctaacccttcg
gataatatgtacagcatgtttgaacagtatgaaaattttgtgaccagcggcaaccatctg
cggctccaggatctcagcttttcctatgatctcccggtatctatgttaccaaaatcggtg
tttaagaatatacagttctatgcatatgcccggaacctgggaataatgtggaaagctaac
cattacggcatagatcctgattatcctaatgcagattatgttgtgccaaaaagttttgct
tttgggctgaggttggacttttga
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