Sphingobacterium sp. DR205: G6053_01585
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Entry
G6053_01585 CDS
T06466
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spdr
Sphingobacterium sp. DR205
Pathway
spdr00521
Streptomycin biosynthesis
spdr00523
Polyketide sugar unit biosynthesis
spdr00525
Acarbose and validamycin biosynthesis
spdr00541
Biosynthesis of various nucleotide sugars
spdr01100
Metabolic pathways
spdr01110
Biosynthesis of secondary metabolites
spdr01250
Biosynthesis of nucleotide sugars
Module
spdr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G6053_01585 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G6053_01585 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G6053_01585 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G6053_01585 (rfbB)
00525 Acarbose and validamycin biosynthesis
G6053_01585 (rfbB)
Enzymes [BR:
spdr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G6053_01585 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
NmrA
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QIH31678
UniProt:
A0A6G7BPJ1
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All DBs
Position
373067..374122
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AA seq
351 aa
AA seq
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MNKKILITGGAGFIGSHVVREFVVKYPNYQIVNLDALTYAGNLENLKDIEDRPNYTFVKA
DITDQAAMNAVFEQYQPDGVIHLAAESHVDRSIADPTAFVMTNVIGTVNLLNAAHAIWKD
NFVGKRFHHVSTDEVFGALGESGFFTEDTKYDPHSPYSASKASSDHFVRAYHDTYGLPIV
LTNCSNNYGPNHFPEKLIPLCIHNILHDKPLPVYGDGKYTRDWLFVIDHAKAIDLVFHEG
KDGDSYNVGGFNEWQNIDLIKELCRQMDVKLGREQGTAASLITFVKDRPGHDLRYAIDAS
KINAELGWSPSVTFEQGLSLTIDWFLSNQEWLDHVTSGDYQHYYNNQYHGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagatcttaatcacgggaggcgcaggatttatcggatcccatgtcgttcgt
gaatttgttgtaaagtatccaaattatcagattgttaacttggatgccctgacctatgcc
ggcaatctggaaaatctgaaagatatcgaggatcgtccgaattatacttttgtcaaagct
gatattacggatcaggcggcgatgaatgctgtttttgaacaatatcagccggatggtgtg
attcacttggcggcagaatctcatgtcgatcgttctattgcagatccgacagcatttgtg
atgaccaatgtgatcgggacagtaaatctgttgaatgctgcccatgcgatttggaaggat
aattttgtgggtaaacgttttcatcatgtttctacggatgaggtatttggtgcgttggga
gaatctggtttttttacggaagacaccaaatatgatccacactcaccatattcggcttcc
aaagcgagctcggaccattttgtccgtgcttatcatgatacctatggactgccgattgtg
ctgaccaattgctccaacaattatgggcccaatcattttcctgaaaaactgattccgctg
tgcattcataatattttacacgataagccattgcctgtatacggagacggtaaatatacg
cgcgactggctttttgtgattgatcatgccaaagcgattgatctggtttttcatgagggt
aaggatggtgattcgtacaatgtgggaggctttaacgagtggcagaatatagacctgatc
aaggagctttgccgacaaatggatgttaaattaggccgggaacagggtacggcagcttcc
ctgattacctttgtgaaggatcgtccgggccatgacctgcgttatgcgattgatgcaagt
aaaataaatgcagagctgggctggagcccgtcagtaacttttgagcagggcctgtcactg
acaatagactggttcttgtctaatcaggaatggctggatcatgtgacttcgggagactat
cagcattattataacaaccaatatcacggcgcttaa
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