Sphingobacterium sp. DR205: G6053_05780
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Entry
G6053_05780 CDS
T06466
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spdr
Sphingobacterium sp. DR205
Pathway
spdr03420
Nucleotide excision repair
spdr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6053_05780
03430 Mismatch repair
G6053_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spdr03400
]
G6053_05780
Enzymes [BR:
spdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6053_05780
DNA repair and recombination proteins [BR:
spdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6053_05780
MMR (mismatch excision repair)
Other MMR factors
G6053_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
ResIII
AAA_11
AAA_22
YecM
DEAD
Motif
Other DBs
NCBI-ProteinID:
QIH32431
LinkDB
All DBs
Position
1374319..1376598
Genome browser
AA seq
759 aa
AA seq
DB search
MDYLAGLNPSQRGAVEQTEGPVMIVAGAGSGKTRVITYRVAHLIQKGVDPFNILVLTFTN
KAAKEMRARIVSVVGSEAKNIWMGTFHSVFAKILRVEAELIGYPRNFTIYDTDDTKSLLR
AILKEMNLDDKLYNVNHVYGRISQAKNNLISPQEYNKNEAILAEDISNGRGQLGQIYMTY
AQRCYRAGAMDFDDLLFKTNVLLNKHPEVLHKYQHQFRYLMVDEYQDTNFSQYLIVKRLA
AVNENICVVGDDAQSIYAFRGANIQNILNFQKDYPDVKIFKLEQNYRSTKMIVNAANSVI
ANNQNQLEKNVFSDNEEGEKIKVSRAFSDNEEGKIVADQIIEEKSLKGLNYKDFAILYRT
NAQSRAMEEALRKINIPYKIYGGTSFYQRKEIKDLIAYFRLTFNPNDEEALKRVINYPRR
GIGDTTIEKIMIAADQNQYRIWDVVANAAHFLDGRSATSVGGFAQMVQSFQALAKNSNAF
DTAMHIAQHCGILKELYEDKSVEGLARYENIQELLNGIKEFSEREDIEDRGLDIYMQDIA
LLTNDDNDKDPNADTVSLMTIHSSKGLEFPVVFIVGLEENLFPSQLSLNSRTELEEERRL
FYVAVTRAEKKLLLSYATSRYRWGTLNNCEPSRFLDELNPACLALDFKPRQTSASAGSFQ
GERVAWQQKDSDDVFSKPKPKPMVKTTSILPKAHKPTAGFAPSDTSNLQVGMEVEHERFG
FGKVVNLEGNKGDIKATIFFKELGQKQLLLKFAKLRIIQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttagcgggtttaaacccttcacaacgaggagccgtagagcaaacagaaggc
cctgtcatgattgttgcaggagctggttcaggaaaaacacgggtaattacgtaccgtgta
gcacacttgattcaaaaaggcgttgatccattcaatattttggtattgacatttacgaat
aaagcagccaaagagatgcgcgcgcgtattgtatctgtcgtaggaagcgaagcgaaaaat
atttggatgggaacattccactccgtattcgcaaaaatacttcgggtagaagctgaactg
atcggatacccccgaaattttaccatctacgatacggacgataccaaaagcttgctgcgt
gccattctcaaggaaatgaacctggatgacaaattatacaatgtcaatcatgtctatggc
cgcatatcacaagccaagaataatttgatctctccacaggaatacaataaaaatgaggcc
atattagccgaagatatttcgaatgggcgcgggcaattgggacagatttacatgacctat
gcacagcgctgttatcgcgcgggtgccatggattttgatgatctcctgttcaaaacgaat
gttttattgaataaacacccggaggtattgcataaataccagcatcaatttcgttacctg
atggttgatgagtatcaggataccaacttctcgcagtacctaatcgtcaaaagactggcc
gcagtcaatgaaaatatatgtgtcgttggtgatgatgcgcagtcaatatatgccttccga
ggggccaatattcagaatatcctgaacttccagaaagattatccggatgtcaagatcttt
aaattggagcagaattacagatccaccaaaatgattgtcaatgcggcaaattcggtgatc
gccaataatcagaaccagctggaaaagaatgttttttcggataatgaagaaggtgaaaaa
attaaggtttcacgtgctttttccgataatgaagaggggaaaatcgttgcagatcagatt
attgaagagaaatctctgaaaggactcaattacaaagattttgctattctttatcggacc
aatgcgcaatcacgggcgatggaagaagccctgcgcaagatcaatataccctataagatc
tatggtggtacgtctttctaccaacggaaggaaattaaagacctgatcgcgtatttccgt
cttaccttcaatcccaatgatgaggaagcattgaaacgcgttattaactacccacgtcgg
ggaatcggagatacaacgattgaaaagattatgattgctgccgatcagaaccaatatcgc
atttgggatgtggtggccaatgcggcacatttcctggacggtcgcagtgcgacttccgtg
ggaggtttcgcacagatggtacaaagttttcaggccctggctaaaaatagcaatgcgttt
gacacggcgatgcatattgcgcagcactgtggtatattgaaagaactttatgaagataag
tcggtagagggattggcacgttatgaaaacattcaggagctactcaatggtatcaaagag
ttttcggaacgggaagatattgaagaccgtggccttgacatatacatgcaggatatcgct
ttattgaccaatgatgacaacgataaagatccgaatgcagacaccgtttctttgatgacc
atacactcttctaaaggacttgaatttccggttgtttttattgtaggcttggaagaaaat
ctgtttccatctcagttgtcattgaattccaggacagaattggaggaagaacgaagactt
ttttacgttgctgttaccagagctgaaaaaaaattactactttcgtatgctacttcgcga
tatcgttgggggacgttgaataactgcgaacccagtcgtttcttggatgaactgaatcct
gcttgtcttgcattggattttaaaccccgacaaacttccgcttcagccggaagttttcaa
ggcgaacgagtcgcgtggcaacaaaaggacagtgatgatgtgttttcgaaacctaagcct
aagccgatggttaaaacaacgtctatactgcccaaagcccacaaacctactgcgggtttt
gctccttctgatacatcaaatcttcaggtcggcatggaagttgaacatgaacgcttcgga
tttggtaaagttgtcaacctagaaggaaataaaggagatataaaagcaactattttcttt
aaggagttgggacagaaacaattgttgcttaaatttgcaaaacttagaataattcaataa
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