Sphingobacterium sp. DR205: G6053_12205
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Entry
G6053_12205 CDS
T06466
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spdr
Sphingobacterium sp. DR205
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spdr03032
]
G6053_12205 (topA)
03400 DNA repair and recombination proteins [BR:
spdr03400
]
G6053_12205 (topA)
Enzymes [BR:
spdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G6053_12205 (topA)
DNA replication proteins [BR:
spdr03032
]
Prokaryotic type
DNA Topoisomerases
G6053_12205 (topA)
DNA repair and recombination proteins [BR:
spdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G6053_12205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF7646
Motif
Other DBs
NCBI-ProteinID:
QIH33600
UniProt:
A0A6G7BUS3
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Position
2895410..2897809
Genome browser
AA seq
799 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEGYLGSDFLVKSSYGHIRDLVKTDDAINTEKNFEQKYEVPSDK
KAVVSELKKLAKAAETVWLASDEDREGEAISWHLFETLGLKDESTKRIVFHEITKPAILK
AIDNPRKIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVDRER
EINKFEPEAAFKIVAFFHTGKIKDSFKAELPQRFATEAEATRFLEDCKAALFAVKHLETK
PSKRSPAAPFTTSTLQQEASRKLGFSVARTMQVAQRLYESGRITYMRTDSVNLSDTAIEA
AEKEIKSAYGNQYHKVRKYKTKTSGAQEAHEAIRPTYFSEHTIEGDSAEKRLYELIWKRA
IASQMSEAEFERTLAKISISTRPEDLNASGEVMKFDGFLKVYMESVDDDQETTLDEDSDN
AILPPLTVGLQLTLKNMSATERFTRPPARYTEAALVKKLEELGIGRPSTYAPTISTIQNR
GYVVKEEREGRSRDYRVLTLENAELKAVTKTEITGAEKGKMFPTDIGIVVNDFLVEHFNG
IVDFHFTANVEKEFDDIAHGLTEWTKMLHDFYGPFHSEVEDTLENADRANNERELGIDPV
SGKPVSVRIGKFGPLVQIGSPDDEEKPRFASLRKGQMIETITFEDAMELFKLPKKVGVFE
DKEMTVAIGRFGPYIRHNSAFYSLPKGVDPLDVTEEECIQIIQEKRQKDIEKVIRVFDEN
PDAQIEQGRWGPFIRFGKQNLKIPKGTEIEKISYEDVLKWAEADAPKGKAVKAKTAEKKT
VAKKATAKKAPAKKTTKSK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaatttattgatagttgagtctccggcgaaagcaaaaacgatagaaggatat
ttaggaagcgattttttggtaaagtcgagttatgggcatatccgtgatttggtgaaaacc
gatgatgcgattaatacagagaagaattttgaacagaagtatgaagttccctctgataaa
aaagcagtcgtgagtgagctgaagaaattagctaaggcagcggaaactgtttggcttgca
tccgatgaggaccgcgagggagaagctatttcctggcatttatttgagacattgggattg
aaagacgaaagtacaaaacgtattgtgtttcatgagatcaccaaaccggcgatattgaaa
gccatcgacaatccccgtaaaatagattataatcttgtcaacgcacaacaggcgagacga
gttttagatagattggtgggttttgaactgtccccggttttatggaaaaaggtgaaacct
tctttatcagcaggtcgtgtacaatctgttgcagttcgattaattgtagaccgcgaacgt
gagattaacaagtttgaaccggaggcggcttttaagattgttgcgtttttccatacgggc
aagattaaagatagttttaaagccgagcttccacaacgatttgcgacggaagcagaagcg
acacgatttttggaagattgtaaagccgctttgtttgcggttaaacatctggaaacaaaa
ccgtcaaaacgttcgccggctgcgccatttaccacatcaaccttacaacaggaagcaagt
agaaaacttggcttctcggtcgcaaggacgatgcaggttgctcaacgtttatatgagtcg
ggacgtattacctatatgcgtacagattccgtcaatttgagtgatacggctattgaagcg
gcagaaaaagaaattaaatcggcttatggcaatcaataccataaagtaagaaaatataaa
acaaaaacttcgggtgcgcaagaggcacacgaggctatacgtcctacctatttttcggaa
cataccattgaaggtgattcggctgaaaaaaggttatatgaactgatctggaagagagca
attgcatctcagatgagtgaagcagaatttgaacgtacgctggctaagatttctatttct
acacgtccggaagatctgaatgcttcaggagaggtgatgaagtttgacggttttctgaaa
gtttatatggaatccgtagatgatgatcaggagacaacactggatgaagatagcgataac
gccatcctgccaccattgacggttggattacagctgacgttgaaaaacatgtcagcgacg
gagcgctttacaagacctccggcacgttatacggaagcggcattagtgaaaaaattagag
gaactaggtatcggtagaccgtctacctatgcgccaaccatttctacaattcaaaatcgt
ggttatgttgttaaagaagaacgggaaggaagatcacgcgactatcgggtattgactctc
gagaatgccgaactgaaagccgttacaaaaacagaaattacaggtgccgaaaaagggaaa
atgttccccactgatatcggtattgtcgtgaatgatttcttggtggagcatttcaatggt
attgtagattttcactttacggcgaatgtcgagaaagagtttgacgatattgcgcatgga
ttgaccgagtggacaaaaatgctacacgatttctatggcccttttcactccgaagtggag
gatacgctggaaaatgcggatcgtgccaataatgaacgtgaactgggtatagatccagtt
tccggaaaaccggtttctgtacgtatcggaaaattcgggcctctggttcagatcggttcg
ccagatgatgaggaaaaacctcgattcgcatcgttgcgcaaaggacagatgattgaaacg
attacctttgaagatgccatggagctatttaaactccccaaaaaagtaggtgtatttgaa
gataaagagatgacagttgctatcggtcgatttggaccttatatccgtcataattccgct
ttctattctttgccaaaaggcgtagatcccttggacgttaccgaagaggaatgcattcag
attattcaggagaaacgtcagaaagatattgaaaaagtgatccgtgtttttgatgaaaat
ccggatgcacagatcgaacagggccgttggggaccgttcatccgttttggaaagcagaac
ttgaaaattccgaaaggaacagaaatcgaaaaaatcagctatgaagatgtgctgaagtgg
gcggaagcggatgcaccgaaaggtaaagctgttaaagcaaaaactgccgaaaagaaaaca
gttgctaaaaaagcgacagcaaagaaggctccagcaaagaaaacgacaaagtctaaataa
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