Sphingobacterium sp. DR205: G6053_12905
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Entry
G6053_12905 CDS
T06466
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spdr
Sphingobacterium sp. DR205
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spdr03032
]
G6053_12905
03400 DNA repair and recombination proteins [BR:
spdr03400
]
G6053_12905
Enzymes [BR:
spdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G6053_12905
DNA replication proteins [BR:
spdr03032
]
Prokaryotic type
DNA Topoisomerases
G6053_12905
DNA repair and recombination proteins [BR:
spdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G6053_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QIH33728
UniProt:
A0A6G7BVF3
LinkDB
All DBs
Position
complement(3065859..3066824)
Genome browser
AA seq
321 aa
AA seq
DB search
MKIKNKQGYTRRKIRKTFKYFDNSGQEITDPKILERIHHLVIPPNWKDVWIAKSARNDLQ
AYGFDQKDRKQYIYHPKFVHQKQTDKFRHVLYMGQYLQDLRKISSRHLKHRDWTMEKLCA
IAFKIMDSTLIRIGNKRYTLENKSYGLSTLEKRHVKITDNTITFAYKGKKGVFQEKTWRD
KLQAKLLGELLQLKGKNLFQLDKKIGKSNFCGRTFNAYLRNHCPGQITCKDIRIWGASRE
AFDLLSRSKQGDDLNTRKKQLNEVIKTVAKQLGNTKTVSQNYYIHPVIQQVYMEGKFPFI
KEKLTGSKLEYKLFRFLLKYS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaaaataaacaaggctatacaaggcgaaagattagaaaaacctttaaatat
tttgataactcaggccaagaaattacggatccaaagatattggaaaggatacatcatttg
gtcattccgccaaattggaaagatgtctggattgcaaagagtgcaagaaatgatctccag
gcctatggttttgaccagaaggaccgcaaacaatatatctatcatccaaaatttgtccat
caaaaacaaaccgataaatttagacatgtgctctatatgggtcagtaccttcaggatctt
agaaaaataagctcccgacatttgaaacatagggactggacgatggaaaaattatgtgca
attgcttttaaaataatggatagtacgcttatacgaattggcaataagcgttatacactg
gaaaacaagtcgtatggtctcagcacccttgaaaaacggcatgtcaagataacggacaat
accatcacattcgcttacaaaggaaaaaaaggtgttttccaggaaaagacctggcgagac
aaactacaggcaaaattacttggcgagctgctccagctaaaaggaaaaaacctatttcag
ctcgataaaaaaataggcaaaagcaatttttgcggacgcacttttaatgcctatctgcgt
aatcattgtccaggacagatcacctgtaaagatatccgtatctggggagccagcagagaa
gcgttcgatctattatcccgatcaaaacagggagatgatctaaacacgcgaaaaaaacaa
ctaaatgaggtaataaagacggtcgccaaacaattgggcaataccaaaactgtatcacaa
aattattatatccatccggttatacaacaggtatatatggaaggaaaattccctttcatc
aaagaaaaattgacagggagtaagctcgaatataaactatttcgctttctgttaaaatat
agctaa
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