Sphingobacterium sp. DR205: G6053_16005
Help
Entry
G6053_16005 CDS
T06466
Name
(GenBank) PDZ domain-containing protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
spdr
Sphingobacterium sp. DR205
Pathway
spdr01503
Cationic antimicrobial peptide (CAMP) resistance
spdr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G6053_16005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
G6053_16005
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spdr01002
]
G6053_16005
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
spdr03110
]
G6053_16005
Enzymes [BR:
spdr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
G6053_16005
Peptidases and inhibitors [BR:
spdr01002
]
Serine peptidases
Family S1: chymotrypsin family
G6053_16005
Chaperones and folding catalysts [BR:
spdr03110
]
Other chaperones and cochaperones
DegP / HtrA
G6053_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
Motif
Other DBs
NCBI-ProteinID:
QIH34296
LinkDB
All DBs
Position
3738840..3740483
Genome browser
AA seq
547 aa
AA seq
DB search
MITCYNCCLAQSKQTADREIPRSIIDRALAASIKMFGIDSVSGQQNSAPFSGVIVCTDGS
ILTVAHSTKPGNFYRVIFPNGKQGLAKALGRLVVDQQSNLPDIAMMKMQGEGPWPFAEMG
WSSSISEKQRCFGLSYPETLPFNFPFLRAGRILKKMDDYGFIQSSSIMEPGDSGGPLFDA
LGRVIGLHSRIDAAEGSNFEVPVNSYRIYWRSLTHPTAISSYPTDPDSIGSDPLAKKLAE
LGLKKPAQDPKTNVQPIPIGSTLNGYRTRILGTAFNLANNKQVILSKSSQVGAAPIATIH
NRNYALKILFRDEKNDLIALVSDHKFPAVTASKIAGQGLPDSLLGIKLWSLLAANQRKTG
VLGMWPQTFPRIPIPGTFDAQMQEIQGFPTLTKVDSMGAADRAGLLAGDRMIALNGHDVA
SAAKINAAMQQFYAGDTLQVHFRRGVTELHTKIILSRWNLRENPHPANNIPQGKSLRRDN
FPRVFIHDSRIHADECGSPIVDSKGNFIGLNIARFSHTACLAIPRDTILDVLSKAQHLIS
SSKSENY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgatcacgtgttacaattgctgcttagcacagagcaagcagaccgctgaccgcgagata
ccgagatctattattgaccgggcgctagcggcttccataaaaatgttcggtatagacagt
gtgagcggtcaacaaaacagtgcgcctttcagtggagtcatcgtgtgcacggatggatct
atcctcactgtggcgcattccacgaagccgggcaatttctatcgtgtgatttttcctaat
ggcaagcagggtcttgccaaagcgctcggacgacttgtcgtcgaccaacagagcaacttg
cccgatattgccatgatgaagatgcagggcgaaggcccctggcctttcgccgagatgggc
tggtcctcatccatctctgaaaaacaacgctgctttgggctatcctatcccgaaaccctg
cccttcaactttccctttcttcgcgctggacgcattctaaaaaaaatggatgactatggt
ttcattcaaagcagcagtatcatggagcccggtgattccggaggccccttgtttgatgcc
ctaggccgcgtaataggtctacatagccgtattgacgctgcggagggtagcaattttgag
gttcctgtaaacagctatcgcatctattggcggtcgctgactcatccaactgcgatcagc
agttaccccactgatcccgattcaatcggtagtgatcccttagcaaaaaagctcgcggaa
ttggggctcaaaaaaccagctcaagatccgaaaacaaacgttcagcccatccccatcggt
agtacattaaacggatatcgaacgcgtatattaggtactgcatttaacctggcaaacaat
aagcaggtaattttatccaaaagcagccaggttggtgcggcgccaatcgccacaattcac
aacagaaactatgccttgaagatcttgttcagagatgaaaaaaacgacctaatagcactt
gtgagtgaccataaatttccggcagtcactgcatcgaagatagccgggcaaggccttcct
gattccttactcggaataaagttgtggtcgctgcttgcggccaatcagcgtaaaaccggt
gtcctcggcatgtggccccaaacattcccacgaattcccatcccgggaacgttcgatgca
cagatgcaggaaatccaaggctttccaacattaacaaaagtggacagcatgggtgctgca
gaccgagccggacttcttgctggcgacagaatgattgcattaaacggtcatgatgtggca
agcgccgccaaaatcaatgccgcgatgcaacaattttatgcaggtgatacactccaggtt
cacttccgacgcggggtgaccgagctacatacgaagatcattctttccagatggaacctt
cgggaaaatccacatccggccaacaacattcctcaaggaaagtcattgcgaagggataat
tttccgcgagtatttatccacgattcacgcattcatgctgacgaatgtggaagtccgatc
gtcgatagcaaaggcaattttataggactcaatatcgcacgctttagtcatacagcctgc
cttgctatccctcgagatacaattctggacgttttatcgaaagcgcaacatctaatcagt
agttcgaaaagtgaaaattattag
DBGET
integrated database retrieval system
