Sphingobacterium sp. DR205: G6053_19845
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Entry
G6053_19845 CDS
T06466
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spdr
Sphingobacterium sp. DR205
Pathway
spdr00300
Lysine biosynthesis
spdr00470
D-Amino acid metabolism
spdr01100
Metabolic pathways
spdr01110
Biosynthesis of secondary metabolites
spdr01120
Microbial metabolism in diverse environments
spdr01230
Biosynthesis of amino acids
Module
spdr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spdr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G6053_19845 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G6053_19845 (lysA)
Enzymes [BR:
spdr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G6053_19845 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIH35009
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Position
complement(4557303..4558463)
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AA seq
386 aa
AA seq
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MINTAIAAKFAEKETPFYYYDLAVLNKTLEAAYTASQKRGFHVHYALKANFNDVLLKAMQ
QIGFGADCVSGNEVKKAIECGFAPQNITFAGVGKSDKEINYALQQNIFAFNVESIQELEV
INELASKQGVKANVALRINPNVDAHTHHYITTGLDENKFGIPNADLEKCAAVLKKCDFIE
LVGLHFHVGSQITDMTVFKSLCVKVNEWKNWFEERGTKIRVLNVGGGLGIDYKDPDGNPI
PDFEAYFDIFDRFLERKPHQEVHFELGRALVAQCGSLVSRVLYVKNGVKKNFLVLDAGMT
ELMRPALYQAYHKMENISEGSGAEALNYDVVGPICESSDCFGKEVPLPVSKRGDLIAIRS
AGAYGEVMASRYNLREEIRFVYSDQL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgataaatacagctattgcggcaaaattcgcagagaaagaaacgccgttttattactac
gacttggccgtgttgaacaaaaccttggaagcggcttatactgcttcccaaaaaagggga
ttccatgttcattacgcattgaaagccaattttaacgatgtgttattaaaagctatgcaa
cagatcggtttcggtgcggactgtgtgagcggaaatgaagtgaaaaaggctattgaatgt
ggcttcgcgccccagaatattacttttgccggcgttggaaaatcggataaagagatcaat
tatgcactacagcaaaatatctttgcattcaatgtggagtctattcaggagcttgaggtt
atcaacgaactggcttcaaaacaaggtgtaaaagccaatgttgctttgcgaataaatccc
aatgttgatgcacatacccatcattatataacaacaggacttgacgagaacaaatttggt
attccaaatgcggatttagagaaatgcgctgctgttcttaagaaatgtgattttatagag
ttggtgggattacactttcacgtgggctctcagattaccgatatgacggtattcaaaagt
ttgtgtgtaaaggtcaacgagtggaagaactggtttgaggaacgcgggacaaagatccgt
gtgttgaacgttggtggtgggcttgggatagactataaagatccggatggcaatccgatt
ccggattttgaagcctatttcgatatttttgaccgtttcttggagcgcaaaccccatcag
gaagttcattttgagctaggtagagccttggtcgctcagtgtggaagcttagtgagccgt
gtattatatgtcaagaatggcgtcaagaaaaactttttggtactggacgcgggaatgact
gaattgatgcgtccggctttgtaccaggcttaccataaaatggaaaatatcagtgaaggc
tcgggagcggaggcgctaaactatgatgttgtcgggccaatttgtgaatcctcggactgc
tttgggaaggaagtgcctttgcctgtatcaaaacggggggatttgatcgctatccgttca
gctggagcctatggtgaggtaatggcttcccgttataatttgagagaagaaatcagattt
gtctacagcgatcaactgtaa
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